PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG045310.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 193aa MW: 20386.1 Da PI: 8.1346 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 111.8 | 4.6e-35 | 41 | 135 | 1 | 91 |
DUF260 1 aCaaCkvlrrkCakdCvlapyf....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrr+C+++Cv+ap+f ++ +++fa+vh++FGasnv kll+++p r+d++++++yeA+ar+ dPvyG+vg+il+lq+q+ TRIDC3AG045310.2 41 PCGACKFLRRRCVPGCVFAPHFsgsgRERGAAQFAAVHRVFGASNVAKLLSRVPVALRRDTARTVCYEAQARVADPVYGCVGTILALQHQVTA 133 7*********************766333448***********************************************************987 PP DUF260 90 lk 91 l TRIDC3AG045310.2 134 LT 135 75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
SAMQEEPAPP RKRGGAVHGS AAREQQQQAD ETSSSAGPGA PCGACKFLRR RCVPGCVFAP 60 HFSGSGRERG AAQFAAVHRV FGASNVAKLL SRVPVALRRD TARTVCYEAQ ARVADPVYGC 120 VGTILALQHQ VTALTTLQKT LALASTHPDG AEQLAVLQPA YSAASAPSQM VNYDDLPQAV 180 DFMDVEPQMR GLE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03760.1 | 3e-43 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG045310.2 |