PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG043990.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 432aa MW: 47568 Da PI: 8.2052

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG043990.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.8	2.1e-13	27	66	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk CnC++skClk+YCeCfa+g +C+ C+C++C+N+ e+ TRIDC3AG043990.6 27 KKKCCNCRHSKCLKLYCECFASGIYCDG-CNCTNCFNNVEN 66 799***********************.******9875 PP
2	TCR	51.5	2e-16	111	149	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN TRIDC3AG043990.6 111 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNF 149 589***********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
CSYVFRKPES PKPRGRLYDG KDGTPTKKKC CNCRHSKCLK LYCECFASGI YCDGCNCTNC 60 FNNVENEVAR REAIEATLER NPDAFRPKIG SSPHTNRNNM EVAGDVPLIG KHNKGCHCKK 120 SGCLKKYCEC FQANILCSEN CKCMDCKNFD GSEDRKHLNL DHKNVIHMQQ AANAAVNGAI 180 GATALSSPST SRKRKHIDSS LDLSTKEHLA IRNGQLSQVI YQKNAMASDG SLPIGQSAHP 240 HMMGPFKVTY RPLLADIIQP GDVKELCKLL VTVSGQAAKA YTGRKIQEEK VAEKEDGVGG 300 SLALTNHDRE GKNKDQNHRK ISIDDHSSGG TDMGKASLDD SRPDCTDDQK SSRPMSPGTL 360 ALMCDEQDAM FATSQYAVAP PAIDVDQNRS ELYAEQERCV LTEFRDCLRK LVQYGRMKGT 420 SNILALCFAK LG

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

CSYVFRKPES PKPRGRLYDG KDGTPTKKKC CNCRHSKCLK LYCECFASGI YCDGCNCTNC  60
FNNVENEVAR REAIEATLER NPDAFRPKIG SSPHTNRNNM EVAGDVPLIG KHNKGCHCKK  120
SGCLKKYCEC FQANILCSEN CKCMDCKNFD GSEDRKHLNL DHKNVIHMQQ AANAAVNGAI  180
GATALSSPST SRKRKHIDSS LDLSTKEHLA IRNGQLSQVI YQKNAMASDG SLPIGQSAHP  240
HMMGPFKVTY RPLLADIIQP GDVKELCKLL VTVSGQAAKA YTGRKIQEEK VAEKEDGVGG  300
SLALTNHDRE GKNKDQNHRK ISIDDHSSGG TDMGKASLDD SRPDCTDDQK SSRPMSPGTL  360
ALMCDEQDAM FATSQYAVAP PAIDVDQNRS ELYAEQERCV LTEFRDCLRK LVQYGRMKGT  420
SNILALCFAK LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-126	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG043990.6