PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC3AG043090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | VOZ | ||||||||
Protein Properties | Length: 382aa MW: 43262.2 Da PI: 4.7873 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 422.6 | 6.2e-130 | 87 | 304 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 p+p++fl+pkcalwdc+rpaqgse +qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vg+p+cegaat+kspwna TRIDC3AG043090.1 87 PAPASFLRPKCALWDCPRPAQGSESWQDYCSMYHAELAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGVPVCEGAATTKSPWNA 179 89*************************************9879************************************************** PP VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185 +elfdl ++ege++rewlffdkprraf+sgnrkqrslpdy+grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein+ da+alyrl TRIDC3AG043090.1 180 PELFDLYIFEGESMREWLFFDKPRRAFDSGNRKQRSLPDYNGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEINDRDAFALYRL 272 ********************************************************************************************* PP VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217 e+k++d+kksak+k ++++l ++q++++rl+a TRIDC3AG043090.1 273 EFKSSDAKKSAKSKFTCSPLIEIQQQMVRLSA 304 ******************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 382 aa Download sequence |
MNESIMYYVN QELSVEDFLY DDDYKINLPG SNPEILNNLE GIGHQEYLQF NLPQELPPNA 60 YLDMNNYGQN AGDGFLHMSD LLTTMSPAPA SFLRPKCALW DCPRPAQGSE SWQDYCSMYH 120 AELAVKEEGP PGTMPVIRPR GIDLKDGPLF AALSAKIQGK HVGVPVCEGA ATTKSPWNAP 180 ELFDLYIFEG ESMREWLFFD KPRRAFDSGN RKQRSLPDYN GRGWHESRKQ VMKDFGGLKR 240 SYYMDPQPSS SYEWHLYEYE INDRDAFALY RLEFKSSDAK KSAKSKFTCS PLIEIQQQMV 300 RLSADGPVEN KRTARARTQD VSTNIYPVQN NTAQANAPDA YQAASQVDQM TFLNGSVVYG 360 PHLPYGYSTE GGDFYWNSND GA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-116 | VOZ family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC3AG043090.1 |