PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG042670.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 432aa MW: 48371.2 Da PI: 5.334

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG042670.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.5	1e-33	13	103	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+ye++++++++ ++ w+ +g+sfvvl + +f +++LpkyFkh+nf+SFvRQLn+YgF+kv+ e+ weF++++F +++++ l TRIDC3AG042670.2 13 FLTKTYEMVDEPATDAVVAWTPSGTSFVVLSQADFCRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPEQ---------WEFANEEFIRDQRHRL 96 9*************************************************************9998.........************ PP XXXXXXX CS HSF_DNA-bind 95 ekikrkk 101 ++i+r+k TRIDC3AG042670.2 97 KNIHRRK 103 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MEGSGGSSSL PPFLTKTYEM VDEPATDAVV AWTPSGTSFV VLSQADFCRD LLPKYFKHNN 60 FSSFVRQLNT YGFRKVDPEQ WEFANEEFIR DQRHRLKNIH RRKPIFSHSS HTQGAGPLAD 120 SERRDYEEEI ERLKCDNASL KLQLERKKTD MESKMKALED KLFAIEGQQK NLISYVREIV 180 NAPGFISSLI EQSDHHGKKR RLPKPISFHE DASTQGNQIM HCDMVNSPTH ELFRASFDKM 240 ESSLNSLENF FKEASEAFGN DVSYDGDVPG HSSAVVLTEL HSSGESEPHA QSPPSMMHTC 300 SAGVGDSHSS RDIAESASCP ESSPLPEAHS RADSRSKVSE IDVNLEPAVT ETGPSRDQQP 360 TQDPPADAND GFWQQFLTEQ PGLSHAHQEA QSERRDREAN QTTAGDRGSF WWGKSVEQMT 420 EKLGHLTSAE KT

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MEGSGGSSSL PPFLTKTYEM VDEPATDAVV AWTPSGTSFV VLSQADFCRD LLPKYFKHNN  60
FSSFVRQLNT YGFRKVDPEQ WEFANEEFIR DQRHRLKNIH RRKPIFSHSS HTQGAGPLAD  120
SERRDYEEEI ERLKCDNASL KLQLERKKTD MESKMKALED KLFAIEGQQK NLISYVREIV  180
NAPGFISSLI EQSDHHGKKR RLPKPISFHE DASTQGNQIM HCDMVNSPTH ELFRASFDKM  240
ESSLNSLENF FKEASEAFGN DVSYDGDVPG HSSAVVLTEL HSSGESEPHA QSPPSMMHTC  300
SAGVGDSHSS RDIAESASCP ESSPLPEAHS RADSRSKVSE IDVNLEPAVT ETGPSRDQQP  360
TQDPPADAND GFWQQFLTEQ PGLSHAHQEA QSERRDREAN QTTAGDRGSF WWGKSVEQMT  420
EKLGHLTSAE KT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45710.1	3e-77	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG042670.2