PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG042190.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 379aa    MW: 42054.4 Da    PI: 10.322
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG042190.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.83.1e-2119118199
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       ffkvl     +k+ rl +p kf++++        +g ke s+  tle +sgr+W+v +  r++ +++++t+GW +Fv+++ L+e +f+vF++d
  TRIDC3AG042190.3  19 FFKVL--IGDFKK-RLKIPPKFCKHIpweasrkaKGLKEASMAATLEGPSGRTWQVVI--RRTAEGTFFTAGWAKFVQDQALRELEFLVFRHD 106
                       66666..555555.6********888********6666799*****************..*******************************99 PP

                       SSSEE..EEEEE-S CS
                B3  86 grsefelvvkvfrk 99 
                       g ++f    +vf+k
  TRIDC3AG042190.3 107 GGTSF--AAMVFDK 118
                       87777..7777766 PP
2B351.22.3e-16279365598
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       +++ +v  s ++++p  f ++h   ++e+++++l+d+ g+ W   +i   + +   l++GW  F++ n L+egD +vF+l+g  ef  +v+vf
  TRIDC3AG042190.3 279 MSTMHVYYSFMMRFPTGFSRQHL--PREKTEMVLRDPGGKAWAALYI--PSTRD-RLSRGWCAFARGNCLEEGDCCVFELVGAAEF--RVHVF 364
                       6788999999*********9995..345679***************4..44333.49***********************997777..99999 PP

                       - CS
                B3  98 r 98 
                       r
  TRIDC3AG042190.3 365 R 365
                       8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MPDAERQSPL ASAERRPHFF KVLIGDFKKR LKIPPKFCKH IPWEASRKAK GLKEASMAAT  60
LEGPSGRTWQ VVIRRTAEGT FFTAGWAKFV QDQALRELEF LVFRHDGGTS FAAMVFDKSA  120
CEREDLLLAG DAPRPRRKRG RPRTASRALD DSAGMELVPY RAPADRPPQA ACSDRMPESD  180
KSNDAEVGAG ELPLCLIAAP PSESGQLLPG HLPAGTKDGG AVKTRSIHGD LAAASIPPSV  240
RKYNGYVSRR RPVASAERQR AMELARAFRS SLPYCVIRMS TMHVYYSFMM RFPTGFSRQH  300
LPREKTEMVL RDPGGKAWAA LYIPSTRDRL SRGWCAFARG NCLEEGDCCV FELVGAAEFR  360
VHVFRVVEPA VPAVRLRLA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1134138RPRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-25B3 family protein