PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG042160.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 332aa    MW: 37486.1 Da    PI: 7.2587
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG042160.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3543e-1751146299
                       EEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                       fkvl     +++ rl +p++f++ +      g++ ++++ +l+ ++g++W v+l  +k ++ ++lt+GW +Fv +n L+e +f++F++d++++
  TRIDC3AG042160.4  51 FKVL--VGDFAR-RLEIPRDFLSYIpevglRGSNISPVQAMLKRSEGKTWVVEL--EKVDCCVFLTTGWTKFVVDNTLREYEFLLFRHDRKMD 138
                       5555..344444.69*******555***9955667999****************..*******************************999999 PP

                       E..EEEEE-S CS
                B3  90 felvvkvfrk 99 
                       f  +v+vf +
  TRIDC3AG042160.4 139 F--MVSVFGR 146
                       9..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
GDSAEVTLHP SHQPTTPPLA PSVARGGMSM NGDRSAGSAM EEDEEGRPRF FKVLVGDFAR  60
RLEIPRDFLS YIPEVGLRGS NISPVQAMLK RSEGKTWVVE LEKVDCCVFL TTGWTKFVVD  120
NTLREYEFLL FRHDRKMDFM VSVFGRNACE KAVRSSGSAA QATESLERKL PCDMFPTCKR  180
GHSGDELTKI TNNLRQSHSL VMIPDQSDTK IFPFHGSTQG NGHISPQSFA DIHRHEVDGL  240
KDELKIYLLL KVPMDDDKAK VIAEVMSRLH VDRVTVDLFC AALCLYKWDS DAAAEVLNTC  300
RGKPQIPNQF LKQKLVLQCK YFYCLIFYHF CI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.17e-14B3 family protein