PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG042160.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 319aa    MW: 36126.6 Da    PI: 7.6733
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG042160.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.12.8e-1738133299
                       EEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                       fkvl     +++ rl +p++f++ +      g++ ++++ +l+ ++g++W v+l  +k ++ ++lt+GW +Fv +n L+e +f++F++d++++
  TRIDC3AG042160.2  38 FKVL--VGDFAR-RLEIPRDFLSYIpevglRGSNISPVQAMLKRSEGKTWVVEL--EKVDCCVFLTTGWTKFVVDNTLREYEFLLFRHDRKMD 125
                       5555..344444.69*******555***9955667999****************..*******************************999999 PP

                       E..EEEEE-S CS
                B3  90 felvvkvfrk 99 
                       f  +v+vf +
  TRIDC3AG042160.2 126 F--MVSVFGR 133
                       9..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
PTTPPLAPSV ARGGMSMNGD RSAGSAMEED EEGRPRFFKV LVGDFARRLE IPRDFLSYIP  60
EVGLRGSNIS PVQAMLKRSE GKTWVVELEK VDCCVFLTTG WTKFVVDNTL REYEFLLFRH  120
DRKMDFMVSV FGRNACEKAV RSSGSAAQAT ESLERKLPCD MFPTCKRGHS GDELTKITNN  180
LRQSHSLVMI PDQSDTKIFP FHGSTQGNGH ISPQSFADIH RHEVDGLKDE LKIYLLLKVP  240
MDDDKAKVIA EVMSRLHVDR VTVDLFCAAL CLYKWDSDAA AEVLNTCRGK PQIPNQFLKQ  300
KLVLQCKYFY CLIFYHFCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53310.16e-14B3 family protein