PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG042160.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 761aa MW: 86943.1 Da PI: 6.6382

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG042160.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.1	1.1e-16	24	119	2	99
EEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 fkvl ++ +rl +p++f++ + g++ ++++ +l+ ++g++W v+l +k ++ ++lt+GW +Fv +n L+e +f++F++d++++ TRIDC3AG042160.1 24 FKVL--VGDFA-RRLEIPRDFLSYIpevglRGSNISPVQAMLKRSEGKTWVVEL--EKVDCCVFLTTGWTKFVVDNTLREYEFLLFRHDRKMD 111 5555..34444.469*****5559955667999*************..*****************************999999 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 f +v+vf + TRIDC3AG042160.1 112 F--MVSVFGR 119 9..9999976 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MSMNGDRSAG SAMEEDEEGR PRFFKVLVGD FARRLEIPRD FLSYIPEVGL RGSNISPVQA 60 MLKRSEGKTW VVELEKVDCC VFLTTGWTKF VVDNTLREYE FLLFRHDRKM DFMVSVFGRN 120 ACEKAVRSSG SAAQATESLE RKLPCDMFPT CKRGHSGDEL TKITNNLRQS HSLVMIPDQS 180 DTKIFPFHGS TQGNGHISPQ SFADIHRHEV DGLKDELKIY LLLKVPMDDD KAKVIAEVMS 240 RLHVDRVTVD LFCAALCLYK WDSDAAAEVL NTCRGKPQIP NQFLKQKLVL QFDFIKRELR 300 HFFPTGDDCP PQIRDSRESS LEEPNLSTQA LQNYLPVVKS KLVDDHEPCD LSYKQKRRIV 360 KSRSQQISET PRRSPRLAHL KNSGGSIESG LKEKPEVLES PPSSTIDQVE HRAGHACLLY 420 EKPDHVFKGD RHHAIGSLSQ DFKRLKRTRG EVGLSEKPQH NQENEENIDQ GNNGEILEEQ 480 VDRNSAETSE SFMESDWIDS SPPTKSNSSS MIINELCLTW RPSVHTNSLE NVLLHIQRDN 540 FMKTITHVQG IIRSFPSDLH CAAIIEAVVQ KEILKWDSCL QDVDAQRVVI ALLEHAKKIK 600 EIHNFNMESR KEEFSTKLQD QLKWQLKELE SVCTSLEFDY KKVTCDGNIA VSTSQEQKKK 660 LHALQDEIKG LQQSMMMEDE IQKLVHQVAE HESLVQKSLM ERVRVKTVLK SYKQVLVEVK 720 ERLASDELGL IDVDALVKVE MDNLRKEIEI SKGRLLNIIF K

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MSMNGDRSAG SAMEEDEEGR PRFFKVLVGD FARRLEIPRD FLSYIPEVGL RGSNISPVQA  60
MLKRSEGKTW VVELEKVDCC VFLTTGWTKF VVDNTLREYE FLLFRHDRKM DFMVSVFGRN  120
ACEKAVRSSG SAAQATESLE RKLPCDMFPT CKRGHSGDEL TKITNNLRQS HSLVMIPDQS  180
DTKIFPFHGS TQGNGHISPQ SFADIHRHEV DGLKDELKIY LLLKVPMDDD KAKVIAEVMS  240
RLHVDRVTVD LFCAALCLYK WDSDAAAEVL NTCRGKPQIP NQFLKQKLVL QFDFIKRELR  300
HFFPTGDDCP PQIRDSRESS LEEPNLSTQA LQNYLPVVKS KLVDDHEPCD LSYKQKRRIV  360
KSRSQQISET PRRSPRLAHL KNSGGSIESG LKEKPEVLES PPSSTIDQVE HRAGHACLLY  420
EKPDHVFKGD RHHAIGSLSQ DFKRLKRTRG EVGLSEKPQH NQENEENIDQ GNNGEILEEQ  480
VDRNSAETSE SFMESDWIDS SPPTKSNSSS MIINELCLTW RPSVHTNSLE NVLLHIQRDN  540
FMKTITHVQG IIRSFPSDLH CAAIIEAVVQ KEILKWDSCL QDVDAQRVVI ALLEHAKKIK  600
EIHNFNMESR KEEFSTKLQD QLKWQLKELE SVCTSLEFDY KKVTCDGNIA VSTSQEQKKK  660
LHALQDEIKG LQQSMMMEDE IQKLVHQVAE HESLVQKSLM ERVRVKTVLK SYKQVLVEVK  720
ERLASDELGL IDVDALVKVE MDNLRKEIEI SKGRLLNIIF K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53310.1	1e-13	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG042160.1