PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG040620.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 509aa MW: 55707.6 Da PI: 4.5903

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG040620.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	33	1e-10	280	319	13	52
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 + L+++Fek++yps+ ++e LA++lgLt q++ WF R TRIDC3AG040620.6 280 QKLKAYFEKEPYPSRPAKESLAQELGLTFHQITRWFSSTR 319 78**********************************8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MHDSWEKVFP ESTSNGLNQI GASDLPSDDS EEDYDPTLAE GDTVDENKSS AEDGDEGSDS 60 DDLDFITSSD ESEPSKKKRS ESKNKNTVND LALPSDDSED DDFDPEGPNS SEDQKTKTNS 120 DESDFTSDSD DFCAEISKSS GKDKVSAPSF SDQTNGVDIM EAELEQDSVL PASNRRQVGH 180 LDYKKLYDEA YGKETTDSSD EEEWSGHSPN GNPEDSDTDS FAGPLKPAKT RRARGGRQNN 240 ERTPQSERHS GSVSEQHPEV LSNGTSSTAR KKSYGPIVNQ KLKAYFEKEP YPSRPAKESL 300 AQELGLTFHQ ITRWFSSTRH YSRVSAAKKG KRLENYTAEN NDGIAADSIQ QREPNGSVLG 360 KPNVDRNGIV SEERMAQKNL DEGEREDTPF RQHIGCEQTL DGTPPANKHN TANSRNDTSR 420 NAEDTPLGQD IGCEQTVAAV NQNCTIGSSN VGSPKGAPGG NKRLKNSPRS VGSPRRGSAE 480 KNIPGLEHVD EARRKAILRE LRKMKAAGR

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MHDSWEKVFP ESTSNGLNQI GASDLPSDDS EEDYDPTLAE GDTVDENKSS AEDGDEGSDS  60
DDLDFITSSD ESEPSKKKRS ESKNKNTVND LALPSDDSED DDFDPEGPNS SEDQKTKTNS  120
DESDFTSDSD DFCAEISKSS GKDKVSAPSF SDQTNGVDIM EAELEQDSVL PASNRRQVGH  180
LDYKKLYDEA YGKETTDSSD EEEWSGHSPN GNPEDSDTDS FAGPLKPAKT RRARGGRQNN  240
ERTPQSERHS GSVSEQHPEV LSNGTSSTAR KKSYGPIVNQ KLKAYFEKEP YPSRPAKESL  300
AQELGLTFHQ ITRWFSSTRH YSRVSAAKKG KRLENYTAEN NDGIAADSIQ QREPNGSVLG  360
KPNVDRNGIV SEERMAQKNL DEGEREDTPF RQHIGCEQTL DGTPPANKHN TANSRNDTSR  420
NAEDTPLGQD IGCEQTVAAV NQNCTIGSSN VGSPKGAPGG NKRLKNSPRS VGSPRRGSAE  480
KNIPGLEHVD EARRKAILRE LRKMKAAGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	5e-08	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG040620.6