PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG040410.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 318aa MW: 34633.1 Da PI: 10.302

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG040410.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	44.1	5.3e-14	18	104	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ e+ aL++a ++ +l+rg+l++p+W+ev++++ ++r r+ +qCk++ + l+k+yk+++++ + s +p+++ql+ TRIDC3AG040410.3 18 CWSEGETAALVDAWGSRYIDLNRGSLRQPQWREVADAVntrpgasARRRPPRTDIQCKNRVDTLKKKYKAERARGGP------SPWPFYRQLD 104 7*****************************************999999*****************999886......46***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MDGKLPPPNP NLPYREDCWS EGETAALVDA WGSRYIDLNR GSLRQPQWRE VADAVNTRPG 60 ASARRRPPRT DIQCKNRVDT LKKKYKAERA RGGPSPWPFY RQLDVLVGPT LSAAAAKKPS 120 PPRALPMLRR RMSPSRSPSP PSPAPPMALP LPNYRRGSNL PAADLFHKAA AAAAAADSDS 180 DDGYNNNNYD DDEGSQQSAS RSVSSHSGGN GPPVLGSGGG GGGGNKRKRG GAGGFGELAM 240 AMETFAEMYE RMEAAKQRHA EEMEKQRIKF LKDLELKRMQ AFVDMQLQLS RVKQAKNGTS 300 EMLMSLAALP FLSNPAYL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58630.1	2e-29	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG040410.3