PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG040030.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 151aa MW: 16818.3 Da PI: 10.1382 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 75.8 | 4.4e-24 | 62 | 138 | 3 | 71 |
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse...........dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr +++ ++ek+e+ g++t+neva+e++se d+kn+rRR+YD++NVL al++i+k ek+eirw+g TRIDC3AG040030.3 62 GWGLREYSKI---VCEKVEAkGRTTYNEVADEIYSElksmahigqgfDEKNIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 138 689*******...*******9**************************************************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
PPRGGAAAAA PAALDLTGVH ILEASSVPPL PERGGNAVQR KGAVDPDKDR KKEKAAAPRI 60 TGWGLREYSK IVCEKVEAKG RTTYNEVADE IYSELKSMAH IGQGFDEKNI RRRVYDAFNV 120 LIALRVIAKE KKEIRWMGLS NYRYEKIKKL E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 2e-33 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG040030.3 |