PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG040030.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 216aa MW: 24383.3 Da PI: 11.4681 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 44.9 | 1.9e-14 | 65 | 118 | 4 | 71 |
E2F_TDP 4 ksLrlltqkflklleksee.givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 ++Lr +++ ++ek+e+ g++t+ne n+rRR+YD++NVL al++i+k ek+eirw+g TRIDC3AG040030.2 65 WGLREYSKI---VCEKVEAkGRTTYNE-----------NIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 118 566666666...677766666666663...........68*******************.*******98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MAPPRGGAAA AAPAALDLTG VHILEASSVP PLPERGGNAV QRKGAVDPDK DRKKEKAAAP 60 RITGWGLREY SKIVCEKVEA KGRTTYNENI RRRVYDAFNV LIALRVIAKE KKEIRWMGLS 120 NYRKFVKNSS TRLGTRRHSS RKSKNSLMIS KTSSYVTKHW KAQHRMLMAS AFHSYWSRHL 180 GKQGWKLRFQ MTQSLPISSS MVHHSHCMMI SQSLRG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 8e-23 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG040030.2 |