PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG040030.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 268aa    MW: 30197.7 Da    PI: 10.446
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG040030.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP741.6e-2371147371
           E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse...........dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       +++Lr +++    ++ek+e+ g++t+neva+e++se           d+kn+rRR+YD++NVL al++i+k ek+eirw+g
  TRIDC3AG040030.1  71 GWGLREYSKI---VCEKVEAkGRTTYNEVADEIYSElksmahigqgfDEKNIRRRVYDAFNVLIALRVIAK-EKKEIRWMG 147
                       689*******...*******9**************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
RNITRTAMAP PRGGAAAAAP AALDLTGVHI LEASSVPPLP ERGGNAVQRK GAVDPDKDRK  60
KEKAAAPRIT GWGLREYSKI VCEKVEAKGR TTYNEVADEI YSELKSMAHI GQGFDEKNIR  120
RRVYDAFNVL IALRVIAKEK KEIRWMGLSN YRYEKIKKLE EVRKELVNKI RNKKALLQEI  180
EKQFDDLQNI KLRNQTLESS AQNVNGIRLP FVLVKTSRKA RVEIEISDDS KFAHFEFNGA  240
PFTLHDDLSI LEGVRRNSIG RAGRATLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.12e-62E2F/DP family protein