PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG039530.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 334aa    MW: 35406.1 Da    PI: 8.6092
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG039530.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.16.4e-11105145446
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        T++Ed  +  + +  G++ W+ Ia++++ gRt++++k++w++
  TRIDC3AG039530.2 105 YTEQEDMVICSLYNSIGSR-WSIIASKLP-GRTDNDVKNYWNT 145
                       69*****************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MGRAPCCDKA SVKRGPWAPE EDELLRSYVR SHGAVGNWIA LPQKAGTCVR VAAARAAAIA  60
APAGASLACR CGALIRARAG LNRCGKSCRL RWLNYLRPDI KHGGYTEQED MVICSLYNSI  120
GSRWSIIASK LPGRTDNDVK NYWNTKLKKK AMAMHQQQQY HHHHGTAARG HARGATIATP  180
PPAPQSQCAS YMQPSPASAS SAVTTASGDA ASFGAMYSPS HQAAPLAHYN VNAAAPLAEF  240
PAMPTPAAAN SWAINMAFED MFLPELVGGG DFSQADLFGG FGALLLQAQD SRAQSSLQEL  300
SACYFPNAQA EMWAADADHV NVKPPGAGLC PSLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37780.13e-60MYB family protein