PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG038870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 185aa    MW: 19892.9 Da    PI: 10.2678
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG038870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B399.22.6e-3111104187
                       EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+k+ tpsdv+k++rlv+pk++ae+h        g  + ++  l +ed  g++W+++++y+++s++yvltkGW++Fvk++gL +gD+v F++ 
  TRIDC3AG038870.1  11 FDKTVTPSDVGKLNRLVIPKQHAEKHfplqlpaaG-GESKGLLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLGAGDVVGFYRA 102
                       89*******************************53.456888************************************************965 PP

                       SS CS
                B3  86 gr 87 
                         
  TRIDC3AG038870.1 103 AA 104
                       44 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
PTPAAAREHL FDKTVTPSDV GKLNRLVIPK QHAEKHFPLQ LPAAGGESKG LLLNFEDAAG  60
KVWRFRYSYW NSSQSYVLTK GWSRFVKEKG LGAGDVVGFY RAAAGSTGEA SKLFIDCKQR  120
PSTNSPAPAD PVDQSPAPVH KAVRIFGVDL LTAPASPGCK RARDMVKPPA PTAALKKQCI  180
ELALA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68840.22e-56RAV family protein