PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG038600.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 188aa    MW: 20890.4 Da    PI: 11.6985
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG038600.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.94.1e-172875148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+eEde l++ v++ G g+W+t +r+ g+ R++k+c++rw +yl
  TRIDC3AG038600.2 28 RGPWTAEEDEVLARFVAREGEGRWRTLPRRAGLLRCGKSCRLRWMNYL 75
                      89******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MARRKPPAQH GARSEDGQAQ STAPPLKRGP WTAEEDEVLA RFVAREGEGR WRTLPRRAGL  60
LRCGKSCRLR WMNYLRPDIK RGHRRGRGGP HPPPPPRPRQ PVVADRREAA GAHGQRDQEL  120
LELAPQQEAR RPGPRPADAH AARRCSRQDG SSYRQDDGGA DGQTAATSAP ASACAADLVC  180
RWNWTRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-29MYB family protein