PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG038170.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 210aa    MW: 22706.8 Da    PI: 4.7145
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG038170.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.81.7e-15751147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rg+++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ 
  TRIDC3AG038170.5  7 RGSFSQQEEDAIVGLHEILGNR-WSQIASHLP-GRTDNEIKNFWNSC 51
                      899*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
LRPDLKRGSF SQQEEDAIVG LHEILGNRWS QIASHLPGRT DNEIKNFWNS CLKKKLRQRG  60
IDPSTHKPIS GVAGVEPDQA SKDERPQGAD GIALKQQQQQ VFDPFPVADT FGAGFDGAGM  120
PLYDHLGGKD AAGFVDYSSV LDVSENLGYG ESSSNSSNWN SAPEASNALE GEALHWASES  180
KVEPFAAYAG DEDGKFALPC HGQQEHSMAH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15258LKKKLRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.39e-36MYB family protein