PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG037720.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 288aa    MW: 31843.4 Da    PI: 9.1294
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG037720.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.36.1e-12556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                      +++WT eE+e l ++v ++G g W+tI +          R+  ++k++w+++
  TRIDC3AG037720.4  5 KQKWTSEEEEALRRGVLKHGAGKWRTIQKDPEfspvlSSRSNIDLKDKWRNL 56
                      79***********************************9************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MGAPKQKWTS EEEEALRRGV LKHGAGKWRT IQKDPEFSPV LSSRSNIDLK DKWRNLSFSA  60
SGLGSRDKLR VPRPKAPSSS PSPSPQLLLL SAPNNVAEAS PPEDCEKSPQ DDKTPSPKLY  120
SSMILEALDE LKEPNGSEVA TICNFIEQRH EVQPNFRRLL CAKLRRLIGV NKVEKIDKSY  180
KLTDSYAKRA LAPMKDPSLK KKDSAKSSKA AKGLGQLSPA LDAAEAAAMK VADAEAKSHL  240
ANEHMMEVER IGKMAEETES LLELASELYE RCSRGEALTI LQVAHREF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-44MYB_related family protein