PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG036720.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 345aa MW: 38637.5 Da PI: 9.3779

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG036720.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34	7.6e-11	86	178	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkr....tsessstcpyfdq 84 +Wt++ + aL++a e+ +r++l + W evs+ + r g s qC+++++ l+k ++k+ke+++ ++++ s+++yfd+ TRIDC3AG036720.1 86 EWTEESTFALLDAWGERFACDGRRSLSADEWLEVSRIVaaaasRPAG-YFSESQCRNRIDTLRKMFRKEKERSRLAahrsSNPAPSKWVYFDK 177 5***********************************888533333.35889**************9987621223566789**99 PP trihelix 85 l 85 + TRIDC3AG036720.1 178 M 178 9 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
KNRTTPNLAG LAIVPANPHR RTAPAQTLAQ HMDHDAAAAS PSASPSSSGA SPSPRSKRRR 60 TDRYALGFEF APRSAPSAPA PRTTPEWTEE STFALLDAWG ERFACDGRRS LSADEWLEVS 120 RIVAAAASRP AGYFSESQCR NRIDTLRKMF RKEKERSRLA AHRSSNPAPS KWVYFDKMLS 180 LMCPPTPTPP PLLPPLTPLV TRRRDTHPVP RRSWGVDVGE LVLAGCSKVV PGNSVPDVQL 240 REKQTYEPVA VQGEEYAILT EAIHRLREVY ERVESSRRQH MAELKRMRKD MQRDLEVRRR 300 EILEKAQMEI ASLEEEDAKD GAVNNRLEDY NGVEEQNNGA LDASP

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

KNRTTPNLAG LAIVPANPHR RTAPAQTLAQ HMDHDAAAAS PSASPSSSGA SPSPRSKRRR  60
TDRYALGFEF APRSAPSAPA PRTTPEWTEE STFALLDAWG ERFACDGRRS LSADEWLEVS  120
RIVAAAASRP AGYFSESQCR NRIDTLRKMF RKEKERSRLA AHRSSNPAPS KWVYFDKMLS  180
LMCPPTPTPP PLLPPLTPLV TRRRDTHPVP RRSWGVDVGE LVLAGCSKVV PGNSVPDVQL  240
REKQTYEPVA VQGEEYAILT EAIHRLREVY ERVESSRRQH MAELKRMRKD MQRDLEVRRR  300
EILEKAQMEI ASLEEEDAKD GAVNNRLEDY NGVEEQNNGA LDASP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	4e-24	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG036720.1