PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG034780.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 116aa    MW: 13149.8 Da    PI: 8.8105
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG034780.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH50.73e-164267126
                      --S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                      +ktelC+ + +tG C+yGd+C+FaHg
  TRIDC3AG034780.2 42 FKTELCNKWEETGACPYGDQCQFAHG 67
                      79***********************9 PP
2zf-CCCH20.58.6e-0780105126
                       --S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                       ykte Cr  + +  C+yG rC+F H+
  TRIDC3AG034780.2  80 YKTEVCRMVLNGEVCPYGHRCHFRHS 105
                       9******999966**********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
YNRKPSSRAY SGLGADGGKK GEEQKSKQDA AGELDVYNQG MFKTELCNKW EETGACPYGD  60
QCQFAHGVSE LRPVIRHPRY KTEVCRMVLN GEVCPYGHRC HFRHSLTAAE RLLRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.13e-48C3H family protein