PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG034640.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 152aa MW: 16570.7 Da PI: 7.3531 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58 | 1.6e-18 | 101 | 152 | 3 | 54 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 k+ +++keq + Lee F+ n+++s +++e LA kl+L rqV vWFqNrRa+ TRIDC3AG034640.3 101 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRAR 152 67789*********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 76.5 | 4.5e-25 | 101 | 152 | 2 | 53 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRAR 53 kk+rlskeq++lLEesF+ +++L+p++K++la +L+l+prqv+vWFqnrRAR TRIDC3AG034640.3 101 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRAR 152 9**************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 152 aa Download sequence |
LLLSPSSSPF PCSCFRIGLS PVMGATSPSG LELTMAVPGL SSSSGSEGFV CNNNISNNGG 60 GNMRDLDMNQ PASGGEEEDF LMGGVEEDEE ERGAGGPHRP KKLRLSKEQS RLLEESFRLN 120 HTLSPKQKEA LAIKLKLRPR QVEVWFQNRR AR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70920.1 | 4e-29 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG034640.3 |