PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG034640.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 223aa MW: 24881.3 Da PI: 9.1494 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.9 | 8.2e-19 | 80 | 133 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +++keq + Lee F+ n+++s +++e LA kl+L rqV vWFqNrRa+ k TRIDC3AG034640.2 80 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRARTK 133 67789***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 119.6 | 1.6e-38 | 80 | 167 | 2 | 89 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 kk+rlskeq++lLEesF+ +++L+p++K++la +L+l+prqv+vWFqnrRARtk+k++E+++e+Lkr++ +l+een+rL++eveeLr+ TRIDC3AG034640.2 80 KKLRLSKEQSRLLEESFRLNHTLSPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKHTEMECEYLKRCFGSLTEENRRLQREVEELRA 167 9*************************************************************************************94 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
VMGATSPSGL ELTMAVPGLS SSSGSEGFVC NNNISNNGGG NMRDLDMNQP ASGGEEEDFL 60 MGGVEEDEEE RGAGGPHRPK KLRLSKEQSR LLEESFRLNH TLSPKQKEAL AIKLKLRPRQ 120 VEVWFQNRRA RTKLKHTEME CEYLKRCFGS LTEENRRLQR EVEELRAMRM APPTVLSPHT 180 RQPLPASALT MCPRCERVTA ATCPRITRPA ASPFHPRRPS AAF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01430.1 | 2e-64 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG034640.2 |