PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG034260.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 228aa MW: 24969.8 Da PI: 8.9409 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 86.3 | 3.1e-27 | 41 | 92 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 + +Y+eCl+NhAa+ Ggh++DGC+Efmp+ + + l CaACgCHR+FHRr+++ TRIDC3AG034260.2 41 RRQYHECLRNHAAAAGGHVLDGCCEFMPA----SPEDPLACAACGCHRSFHRRDPS 92 568*************************9....4458****************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MEFRGEEDGD GSDVGDGAPP AAPHRSATAN GPADNMQAEA RRQYHECLRN HAAAAGGHVL 60 DGCCEFMPAS PEDPLACAAC GCHRSFHRRD PSPRRAHLPL LAASARAPLL LPPAASKHPH 120 QRLPFPYGLA ASGGTGTTTE SSSEERRGAS PAPRKRSRTT FTREQKEQML AFAERVGWRL 180 QRQDEAMVGH FCAQAGVRRQ ALKVWMHNNK QSSSGRRQQQ EKQQLQEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 7e-38 | ZF-HD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG034260.2 |