PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG033290.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 156aa MW: 17575.6 Da PI: 8.8545 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 28.4 | 2.9e-09 | 50 | 69 | 7 | 26 |
SGGGGTS--TTTTT-SS-SS CS zf-CCCH 7 rffartGtCkyGdrCkFaHg 26 +f+ +tG+Ck+ ++CkF+H+ TRIDC3AG033290.3 50 QFYKKTGFCKFSEKCKFHHP 69 59*****************9 PP | |||||||
2 | zf-CCCH | 40.9 | 3.3e-13 | 102 | 125 | 4 | 27 |
---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHgp 27 e C ++++tG Ck+G +CkF H+p TRIDC3AG033290.3 102 EACAYYMKTGACKFGVQCKFDHPP 125 78********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MCRLNLSQSP TLRGLEKLFV MYVHNHPCTN CCSICPMSWT VLLILLWLMQ FYKKTGFCKF 60 SEKCKFHHPV DRSAPDSIAK WEPSQQPVTL TVAGFPRRED AEACAYYMKT GACKFGVQCK 120 FDHPPLGEAI AKVSKHGEGK EGGKKKVVGL SYVLEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12680.1 | 2e-29 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG033290.3 |