PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG032270.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 287aa    MW: 30369.2 Da    PI: 8.4977
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG032270.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-13126170347
                       SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       +W++eE+ l++ + ++lG+g+W+ I+r   ++Rt+ q+ s+ qk+
  TRIDC3AG032270.1 126 PWSEEEHRLFLVGLEKLGKGDWRGISRSYVTTRTPTQVASHAQKF 170
                       8******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MARKCSHCGN YGHNSRTCSS AAGNQGEVML CEGGGGSSGG SGLRLFGVQV HVAAGRSTGA  60
GASMRKSYSM DCLQLAVAPS SIVSPSSSSS SSVLLSIDEG LERASNGYLS DGPHGRLVQE  120
RKKGVPWSEE EHRLFLVGLE KLGKGDWRGI SRSYVTTRTP TQVASHAQKF FLRQSSMGKK  180
KRRSSLFDMV PICENGIRVS EPLTNNSGDA STSLPRYKSP DMASIDLNST QEDDMAMAGV  240
PLLSASPRAP FPAVLMEQPP HGHGHGHHCS PLELELGMSL SPPSIGT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179183KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.11e-48MYB_related family protein