PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG031480.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 302aa    MW: 32876.5 Da    PI: 7.9543
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG031480.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.4e-12556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                      ++rWT eE+  l+ +v+++G+g W+tI r          R+  ++k++w+++
  TRIDC3AG031480.5  5 KQRWTSEEEAALKAGVAKHGPGKWRTILRDTDfsavlCLRSNVDLKDKWRNL 56
                      79***********************************66***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MGAPKQRWTS EEEAALKAGV AKHGPGKWRT ILRDTDFSAV LCLRSNVDLK DKWRNLSVTA  60
GGYGSREKAR MALKQGKRVP KVNTEPMDVD ADNLDNVHDT VIDAKPLAVV VEPSQRECSS  120
EKSVARLVAL WLDDLILEAI KKLKESSGSN KTAIASYIEE QYWPPADFQR LLSTKLKALV  180
VTGKLMKSNQ KYRIAPSSVS LGGRSTKVHS TEDDKQNICI RQLTKPQVDA ELDMMTHMNK  240
EEAAAFAAKA VAEAEVANAE AEEAAKAAEA AEAEAEAAKA FLDAVMLTVQ NKNAASAILR  300
AC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.19e-66MYB_related family protein