PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG031480.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 299aa MW: 32506.1 Da PI: 7.9543 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.7 | 2.4e-12 | 5 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 ++rWT eE+ l+ +v+++G+g W+tI r R+ ++k++w+++ TRIDC3AG031480.4 5 KQRWTSEEEAALKAGVAKHGPGKWRTILRDTDfsavlCLRSNVDLKDKWRNL 56 79***********************************66***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MGAPKQRWTS EEEAALKAGV AKHGPGKWRT ILRDTDFSAV LCLRSNVDLK DKWRNLSVTA 60 GGYGSREKAR MALKQGKRVP KVNTEPMDVD ADNLDNVHDT VIDAKPLAVV VEPSQRECSS 120 EKSVARLVLD DLILEAIKKL KESSGSNKTA IASYIEEQYW PPADFQRLLS TKLKALVVTG 180 KLMKSNQKYR IAPSSVSLGG RSTKVHSTED DKQNICIRQL TKPQVDAELD MMTHMNKEEA 240 AAFAAKAVAE AEVANAEAEE AAKAAEAAEA EAEAAKAFLD AVMLTVQNKN AASAILRAC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 1e-66 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG031480.4 |