PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG031480.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 184aa MW: 20375.5 Da PI: 9.8528 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.8 | 1e-12 | 5 | 56 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47 ++rWT eE+ l+ +v+++G+g W+tI r R+ ++k++w+++ TRIDC3AG031480.3 5 KQRWTSEEEAALKAGVAKHGPGKWRTILRDTDfsavlCLRSNVDLKDKWRNL 56 79***********************************66***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MGAPKQRWTS EEEAALKAGV AKHGPGKWRT ILRDTDFSAV LCLRSNVDLK DKWRNLSVTA 60 GGYGSREKAR MALKQGKRVP KVNTEPMDVD ADNLDNVHDT VIDAKPLAVV VEPSQRECSS 120 EKSVARLDDL ILEAIKKLKE SSGSNKTAIA SYIEEQYWPP ADFQRLLSTK LKALVVTGKL 180 MKVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 2e-64 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG031480.3 |