PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG030830.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 277aa    MW: 30097.9 Da    PI: 7.8113
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG030830.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260124.17.3e-39571571101
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       aC+aCk++rrkC+++C+lapyfpa++p +f+n h+lFG +n+l++l+++ +e+r+d m+s++yeA+ara+dPv Ga+g++++ q++l+ + ae
  TRIDC3AG030830.1  57 ACSACKHQRRKCTPGCPLAPYFPADKPGSFRNSHRLFGIKNILRFLTRAGPEKRDDCMKSILYEADARASDPVLGAYGLLQSHQRELALATAE 149
                       7******************************************************************************************** PP

            DUF260  94 lallkeel 101
                       l++lke+l
  TRIDC3AG030830.1 150 LVALKEQL 157
                       **999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
LGSCSRRHPP WLFPKLISCA GPGMSATPWH PPETAESSSG LSSSSSYPPA AAAQHPACSA  60
CKHQRRKCTP GCPLAPYFPA DKPGSFRNSH RLFGIKNILR FLTRAGPEKR DDCMKSILYE  120
ADARASDPVL GAYGLLQSHQ RELALATAEL VALKEQLELH GHAAQHRSAP DALGFLSPVQ  180
QWMPQPPSMY PIQEGQQQPI YGSYVLTGAA KIDEDATIGV KLDEDDVMPM QHDDHADGCT  240
THYGRLEPSS SSSYRSSDTS PRGLLNRRAL GLKYNPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.15e-24LBD family protein