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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC3AG029280.5 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | MYB | ||||||||
| Protein Properties | Length: 299aa MW: 33148.9 Da PI: 5.3678 | ||||||||
| Description | MYB family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 51 | 3.3e-16 | 20 | 67 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg W++eEde+l++ + ++G g+W++++r g+ R++k+c++rw +yl
TRIDC3AG029280.5 20 RGLWSPEEDEKLYNHIIRYGVGCWSSVPRLAGLERCGKSCRLRWINYL 67
788*******************************************97 PP
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| 2 | Myb_DNA-binding | 46.1 | 1.1e-14 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k+ w++
TRIDC3AG029280.5 73 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNLWNS 116
899*******************.*********.*********9986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 299 aa Download sequence |
MGREAATAVA CSSNKPKLRR GLWSPEEDEK LYNHIIRYGV GCWSSVPRLA GLERCGKSCR 60 LRWINYLRPD LKRGSFSQQE EDLIVSLHKI LGNRWSQIAS QLPGRTDNEI KNLWNSCIKK 120 KLRQQSIDPT THEPLNDAAA VAEPHDECKQ LVPAAEDGGS VGSDDLLAPH SPVDCSFDPM 180 SVTNVPTMHM QGSYSLCDHA STYCAYTGGG DSSSNSNGTG TGTSTWTCGN VEPLPHMDMF 240 RDAEPYPFDP TKFSPWHQQH APDDDRGSAV FPIRSLSRDL PESCFELARG ALEDEFDFM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G26660.1 | 1e-70 | MYB family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC3AG029280.5 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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