PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG029280.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 267aa    MW: 29680.1 Da    PI: 4.7072
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG029280.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.39.5e-154184146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k+ w++
  TRIDC3AG029280.3 41 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNLWNS 84
                      899*******************.*********.*********9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MYYLLLDQEL KCVSLNCSGL ERCGKSCRLR WINYLRPDLK RGSFSQQEED LIVSLHKILG  60
NRWSQIASQL PGRTDNEIKN LWNSCIKKKL RQQSIDPTTH EPLNDAAAVA EPHDECKQLV  120
PAAEDGGSVG SDDLLAPHSP VDCSFDPMSV TNVPTMHMQG SYSLCDHAST YCAYTGGGDS  180
SSNSNGTGTG TSTWTCGNVE PLPHMDMFRD AEPYPFDPTK FSPWHQQHAP DDDRGSAVFP  240
IRSLSRDLPE SCFELARGAL EDEFDFM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G57560.12e-48MYB family protein