PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG029280.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 302aa MW: 33507.4 Da PI: 5.5735

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG029280.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.3e-16	23	70	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ + ++G g+W++++r g+ R++k+c++rw +yl TRIDC3AG029280.2 23 RGLWSPEEDEKLYNHIIRYGVGCWSSVPRLAGLERCGKSCRLRWINYL 70 788*******************************************97 PP
2	Myb_DNA-binding	46.1	1.1e-14	76	119	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l+v ++k lG++ W+ Ia+ ++ gRt++++k+ w++ TRIDC3AG029280.2 76 RGSFSQQEEDLIVSLHKILGNR-WSQIASQLP-GRTDNEIKNLWNS 119 899*****************.*****.*******9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 302 aa Download sequence
MRAMGREAAT AVACSSNKPK LRRGLWSPEE DEKLYNHIIR YGVGCWSSVP RLAGLERCGK 60 SCRLRWINYL RPDLKRGSFS QQEEDLIVSL HKILGNRWSQ IASQLPGRTD NEIKNLWNSC 120 IKKKLRQQSI DPTTHEPLND AAAVAEPHDE CKQLVPAAED GGSVGSDDLL APHSPVDCSF 180 DPMSVTNVPT MHMQGSYSLC DHASTYCAYT GGGDSSSNSN GTGTGTSTWT CGNVEPLPHM 240 DMFRDAEPYP FDPTKFSPWH QQHAPDDDRG SAVFPIRSLS RDLPESCFEL ARGALEDEFD 300 FM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	1e-70	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG029280.2