PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG025140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Dof

Protein Properties

Length: 539aa MW: 58121.6 Da PI: 4.8002

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG025140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.5	1.7e-39	157	216	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+s TRIDC3AG025140.1 157 PDKIIPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGSMRNVPVGAGRRKSKNS 216 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MSDQMDSGIK LFGRVIPLVP DAAPGPPEAE ATAGSEHPPP PPPQESEAEA EADNNKEQHK 60 ETKDKGDSEM KVDAPEEKED GGMKGDELRE RKDDEMEVDA PQAKQNAETA SSSTLDHKKD 120 DQAQISNAEE KVASDPKEEN EKKSNDESGQ DKVLKKPDKI IPCPRCNSMD TKFCYYNNYN 180 VNQPRHFCKN CQRYWTAGGS MRNVPVGAGR RKSKNSALHY RQLLMAPDCL LGSRVDISDT 240 VNPEVLASLP SIPTQSASRN ETVLKFGPEV PLCESMVSVL NIEEQNVTNA GSVPRDETRE 300 GNSCASTTTS NNGLPANAVP PGQNGAPVYC NGVGPVPQYY LGPPFMYPWS MGWNNLPVMV 360 PGGSMPESAS PSESCSTSSA PWMNSPMMPG SRLPAPPFPY PIVPPALWGC LPSWPAAAWN 420 TPWVGTNGCI SPSGSSNSSC SGNGSPTLGK HSRDPNPQKD DKEEKSLWVP KTLRIDDPDE 480 AAKSSIWATL GIKPGDPGVF KPFQFKGESK GQPADARPAR ALQANPAAFS RSQSFQESS

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MSDQMDSGIK LFGRVIPLVP DAAPGPPEAE ATAGSEHPPP PPPQESEAEA EADNNKEQHK  60
ETKDKGDSEM KVDAPEEKED GGMKGDELRE RKDDEMEVDA PQAKQNAETA SSSTLDHKKD  120
DQAQISNAEE KVASDPKEEN EKKSNDESGQ DKVLKKPDKI IPCPRCNSMD TKFCYYNNYN  180
VNQPRHFCKN CQRYWTAGGS MRNVPVGAGR RKSKNSALHY RQLLMAPDCL LGSRVDISDT  240
VNPEVLASLP SIPTQSASRN ETVLKFGPEV PLCESMVSVL NIEEQNVTNA GSVPRDETRE  300
GNSCASTTTS NNGLPANAVP PGQNGAPVYC NGVGPVPQYY LGPPFMYPWS MGWNNLPVMV  360
PGGSMPESAS PSESCSTSSA PWMNSPMMPG SRLPAPPFPY PIVPPALWGC LPSWPAAAWN  420
TPWVGTNGCI SPSGSSNSSC SGNGSPTLGK HSRDPNPQKD DKEEKSLWVP KTLRIDDPDE  480
AAKSSIWATL GIKPGDPGVF KPFQFKGESK GQPADARPAR ALQANPAAFS RSQSFQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	4e-69	Dof family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG025140.1