PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG022910.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 461aa MW: 48445.9 Da PI: 6.9012

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG022910.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.2	1.1e-30	191	249	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ TRIDC3AG022910.3 191 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDRTILITTYEGTHNHP 249 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MVVDDDGASR ADEDRNGRNT GELAAMQAEL SRMNEENQRL RGMLTQVNSS YHALQMHLVA 60 LMQQRTQMPP VQPQQPPTHE DGKNESAIVP RQFLGLGPSG ASADVAEEPS NSSTEVGSPR 120 RSSSNGNEDP ERGDNPDGPS TAGWLPGRGM SQQQQQQLGA AAKGHDQQAQ EATMRKARVS 180 VRARSEAPII ADGCQWRKYG QKMAKGNPCP RAYYRCTMAT GCPVRKQVQR CAEDRTILIT 240 TYEGTHNHPL PPAAMAMAST TSAAASMLLS GSMPSADGAG LMSSNFLART VLPCSSSMAT 300 ISASAPFPTV TLDLTHAPPG APNAMPLNVA RPHAPGQFHV PMPGGGMAPA FAMPPHMLYN 360 QSKFSGLQMS SDSVDAGQFA QPRPPMGLPG QLSDTVSAAA AAITADPNFT VALAAAISSI 420 MAGQHAAGNS NANNSNNNTS NNNVTTTSNN TTSNNTNSET Q

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MVVDDDGASR ADEDRNGRNT GELAAMQAEL SRMNEENQRL RGMLTQVNSS YHALQMHLVA  60
LMQQRTQMPP VQPQQPPTHE DGKNESAIVP RQFLGLGPSG ASADVAEEPS NSSTEVGSPR  120
RSSSNGNEDP ERGDNPDGPS TAGWLPGRGM SQQQQQQLGA AAKGHDQQAQ EATMRKARVS  180
VRARSEAPII ADGCQWRKYG QKMAKGNPCP RAYYRCTMAT GCPVRKQVQR CAEDRTILIT  240
TYEGTHNHPL PPAAMAMAST TSAAASMLLS GSMPSADGAG LMSSNFLART VLPCSSSMAT  300
ISASAPFPTV TLDLTHAPPG APNAMPLNVA RPHAPGQFHV PMPGGGMAPA FAMPPHMLYN  360
QSKFSGLQMS SDSVDAGQFA QPRPPMGLPG QLSDTVSAAA AAITADPNFT VALAAAISSI  420
MAGQHAAGNS NANNSNNNTS NNNVTTTSNN TTSNNTNSET Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-108	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG022910.3