PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021790.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 548aa MW: 60844.9 Da PI: 6.422

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021790.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	23.5	1.1e-07	499	524	1	26
RWP-RK 1 aekeisledlskyFslpikdAAkeLg 26 aek+isle+l++yFs+++k+AAk+Lg TRIDC3AG021790.4 499 AEKTISLEVLQQYFSGSLKNAAKSLG 524 589**********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
ETQRARSGNS DTPIKKTERL NNKWQFNLAL HDDSTNSSCL FKEKLTHALR YFKESTDQHL 60 LVQVWAPVKS GDRYVLTTSG QPFVLDHQSI GLLQYRAVSM MYMFSVDGDN AGELGLPGRV 120 YKQKVPEWTP NVQYYSSTEY PRLNHAISYN VHGTVALPVF DPSVQSCIAV VELIMTSKKI 180 NYADEVDKVC KALEAVNLKS TEILEHPNVQ ICNEGRQSAL VEILEILTVV CEEHKLPLAQ 240 TWVPCKYRSV LAHGGGVKKS CLSFDGSCMG EVCMSTSDVA FHVIDAHMWG FRDACVEHHL 300 QKGQGVSGKA FIYHRPCFSK DISQFCKLEY PLVHYARMFG LAGCFAICLQ SPYTGDDYYM 360 LEFFLPPSCK EEDDQNALLE SILGLINQCL RNLKVAGNGE SNEASLQLSN VIMIESEDFK 420 TNVHFENSEG FRESPEGDTH GGAHEFDKAN SKVSEGHLLA DDNSQNNGVS VSRPNGSAAS 480 DSSLLHKNGK PPERRRGKAE KTISLEVLQQ YFSGSLKNAA KSLGGTLLIF SLLSKQILGF 540 LSLTLSDC

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

ETQRARSGNS DTPIKKTERL NNKWQFNLAL HDDSTNSSCL FKEKLTHALR YFKESTDQHL  60
LVQVWAPVKS GDRYVLTTSG QPFVLDHQSI GLLQYRAVSM MYMFSVDGDN AGELGLPGRV  120
YKQKVPEWTP NVQYYSSTEY PRLNHAISYN VHGTVALPVF DPSVQSCIAV VELIMTSKKI  180
NYADEVDKVC KALEAVNLKS TEILEHPNVQ ICNEGRQSAL VEILEILTVV CEEHKLPLAQ  240
TWVPCKYRSV LAHGGGVKKS CLSFDGSCMG EVCMSTSDVA FHVIDAHMWG FRDACVEHHL  300
QKGQGVSGKA FIYHRPCFSK DISQFCKLEY PLVHYARMFG LAGCFAICLQ SPYTGDDYYM  360
LEFFLPPSCK EEDDQNALLE SILGLINQCL RNLKVAGNGE SNEASLQLSN VIMIESEDFK  420
TNVHFENSEG FRESPEGDTH GGAHEFDKAN SKVSEGHLLA DDNSQNNGVS VSRPNGSAAS  480
DSSLLHKNGK PPERRRGKAE KTISLEVLQQ YFSGSLKNAA KSLGGTLLIF SLLSKQILGF  540
LSLTLSDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021790.4