PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021790.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 564aa MW: 62271.6 Da PI: 6.8085

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021790.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.7	2.7e-29	462	513	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l++yFs+++k+AAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ TRIDC3AG021790.3 462 AEKTISLEVLQQYFSGSLKNAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 513 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
AAVPEETQRA RSGYFKESTD QHLLVQVWAP VKSGDRYVLT TSGQPFVLDH QSIGLLQYRA 60 VSMMYMFSVD GDNAGELGLP GRVYKQKVPE WTPNVQYYSS TEYPRLNHAI SYNVHGTVAL 120 PVFDPSVQSC IAVVELIMTS KKINYADEVD KVCKALEAVN LKSTEILEHP NVQICNEGRQ 180 SALVEILEIL TVVCEEHKLP LAQTWVPCKY RSVLAHGGGV KKSCLSFDGS CMGEVCMSTS 240 DVAFHVIDAH MWGFRDACVE HHLQKGQGVS GKAFIYHRPC FSKDISQFCK LEYPLVHYAR 300 MFGLAGCFAI CLQSPYTGDD YYMLEFFLPP SCKEEDDQNA LLESILGLIN QCLRNLKVAG 360 NGESNEASLQ LSNVIMIESE DFKTNVHFEN SEGFRESPEG DTHGGAHEFD KANSKVSEGH 420 LLADDNSQNN GVSVSRPNGS AASDSSLLHK NGKPPERRRG KAEKTISLEV LQQYFSGSLK 480 NAAKSLGVCP TTMKRICRQH GISRWPSRKI NKVNRSLSKL KQVIESVQGS DAAFNLTSIT 540 GPLPTIPVGP SSDSFNKEKA SESK

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

AAVPEETQRA RSGYFKESTD QHLLVQVWAP VKSGDRYVLT TSGQPFVLDH QSIGLLQYRA  60
VSMMYMFSVD GDNAGELGLP GRVYKQKVPE WTPNVQYYSS TEYPRLNHAI SYNVHGTVAL  120
PVFDPSVQSC IAVVELIMTS KKINYADEVD KVCKALEAVN LKSTEILEHP NVQICNEGRQ  180
SALVEILEIL TVVCEEHKLP LAQTWVPCKY RSVLAHGGGV KKSCLSFDGS CMGEVCMSTS  240
DVAFHVIDAH MWGFRDACVE HHLQKGQGVS GKAFIYHRPC FSKDISQFCK LEYPLVHYAR  300
MFGLAGCFAI CLQSPYTGDD YYMLEFFLPP SCKEEDDQNA LLESILGLIN QCLRNLKVAG  360
NGESNEASLQ LSNVIMIESE DFKTNVHFEN SEGFRESPEG DTHGGAHEFD KANSKVSEGH  420
LLADDNSQNN GVSVSRPNGS AASDSSLLHK NGKPPERRRG KAEKTISLEV LQQYFSGSLK  480
NAAKSLGVCP TTMKRICRQH GISRWPSRKI NKVNRSLSKL KQVIESVQGS DAAFNLTSIT  540
GPLPTIPVGP SSDSFNKEKA SESK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021790.3