PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG021740.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 657aa    MW: 72229.5 Da    PI: 6.1675
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG021740.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.83.7e-2276176198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+ltpsd++++g +++ +++a+e+       ++ + +++++ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v    ++
  TRIDC3AG021740.5  76 FCKILTPSDTSTHGGFSVLRRHANEClppldmAMP-TPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYL--RS 165
                       99****************************97444.44569*********************************************999..44 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                       +++e +v+v+r
  TRIDC3AG021740.5 166 ETGEQRVGVRR 176
                       77778999997 PP
2Auxin_resp97.51.9e-32202283183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a k+ ++vGmRf+m+fe ed++ +++ Gt+vg  dl+p +W++S+W+sLk
  TRIDC3AG021740.5 202 ASHALKTNSIFVVYYRPRLSQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDLSP-QWSGSEWKSLK 283
                       789********************************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 657 aa     Download sequence    
QLQEPTDSAL LAEQIKMFQV PYKILCKVVN VELKAEAETD EVYAQITLQP ESDQDNLPLI  60
CDPILPETPR PVVHTFCKIL TPSDTSTHGG FSVLRRHANE CLPPLDMAMP TPTQEIISKD  120
LHGSEWRFKH IYRGQPRRHL LTTGWSTFVT SKKLMAGDAF VYLRSETGEQ RVGVRRLVQK  180
QSTMPASVIS SQSMHLGVLA SASHALKTNS IFVVYYRPRL SQSQYIVSVN KYLQASKTGF  240
TVGMRFRMNF EAEDVPVKKF FGTIVGDGDL SPQWSGSEWK SLKVQWDDSV AICNGPERVS  300
PWEIDSSDAS SPAISALLQS SAKNKRPRET NENFDLPSQE PTQEFWLSGM TQQHERTYVG  360
SSDPNRISGY HQILWPSSEP AGYGAMSSSS VCQTPLGLGD GWPKDFNPSS QGVSPTLSEI  420
TQKLNRVASS EGRTPPPWAT ALCGGYRAEE PTSKLSCNPT LPLPEQVAPY LPKVAEKAKE  480
PGVVRLFGVN LMENTNNAAA PTAGNASAGA GETSARVAGS VEGSGQLSAF SKVTKVANES  540
PREIQSQQSN VGRNRVKVQM HGNAVGRAVD LASLDGYEGL TSELEQMFEI KDIKQNFKVA  600
FTDNEGDTMK VGDDPWMEFC RMVRKIVIYP IEDDKNMDPR QTSVLAAAPD PDPKANL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.11e-141ARF family protein