PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021740.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 673aa MW: 74187.7 Da PI: 6.261

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021740.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	69.7	3.9e-22	92	192	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+ltpsd++++g +++ +++a+e+ ++ + +++++ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v ++ TRIDC3AG021740.4 92 FCKILTPSDTSTHGGFSVLRRHANEClppldmAMP-TPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYL--RS 181 99**************************97444.44569*******************************************999..44 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 +++e +v+v+r TRIDC3AG021740.4 182 ETGEQRVGVRR 192 77778999997 PP
2	Auxin_resp	97.5	1.9e-32	218	299	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a k+ ++vGmRf+m+fe ed++ +++ Gt+vg dl+p +W++S+W+sLk TRIDC3AG021740.4 218 ASHALKTNSIFVVYYRPRLSQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDLSP-QWSGSEWKSLK 299 789******************************************************************.*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
PQRGERVFYF LQGHLEQLQE PTDSALLAEQ IKMFQVPYKI LCKVVNVELK AEAETDEVYA 60 QITLQPESDQ DNLPLICDPI LPETPRPVVH TFCKILTPSD TSTHGGFSVL RRHANECLPP 120 LDMAMPTPTQ EIISKDLHGS EWRFKHIYRG QPRRHLLTTG WSTFVTSKKL MAGDAFVYLR 180 SETGEQRVGV RRLVQKQSTM PASVISSQSM HLGVLASASH ALKTNSIFVV YYRPRLSQSQ 240 YIVSVNKYLQ ASKTGFTVGM RFRMNFEAED VPVKKFFGTI VGDGDLSPQW SGSEWKSLKV 300 QWDDSVAICN GPERVSPWEI DSSDASSPAI SALLQSSAKN KRPRETNENF DLPSQEPTQE 360 FWLSGMTQQH ERTYVGSSDP NRISGYHQIL WPSSEPAGYG AMSSSSVCQT PLGLGDGWPK 420 DFNPSSQGVS PTLSEITQKL NRVASSEGRT PPPWATALCG GYRAEEPTSK LSCNPTLPLP 480 EQVAPYLPKV AEKAKEPGVV RLFGVNLMEN TNNAAAPTAG NASAGAGETS ARVAGSVEGS 540 GQLSAFSKVT KVANESPREI QSQQSNVGRN RVKVQMHGNA VGRAVDLASL DGYEGLTSEL 600 EQMFEIKDIK QNFKVAFTDN EGDTMKVGDD PWMEFCRMVR KIVIYPIEDD KNMDPRQTSV 660 LAAAPDPDPK ANL

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

PQRGERVFYF LQGHLEQLQE PTDSALLAEQ IKMFQVPYKI LCKVVNVELK AEAETDEVYA  60
QITLQPESDQ DNLPLICDPI LPETPRPVVH TFCKILTPSD TSTHGGFSVL RRHANECLPP  120
LDMAMPTPTQ EIISKDLHGS EWRFKHIYRG QPRRHLLTTG WSTFVTSKKL MAGDAFVYLR  180
SETGEQRVGV RRLVQKQSTM PASVISSQSM HLGVLASASH ALKTNSIFVV YYRPRLSQSQ  240
YIVSVNKYLQ ASKTGFTVGM RFRMNFEAED VPVKKFFGTI VGDGDLSPQW SGSEWKSLKV  300
QWDDSVAICN GPERVSPWEI DSSDASSPAI SALLQSSAKN KRPRETNENF DLPSQEPTQE  360
FWLSGMTQQH ERTYVGSSDP NRISGYHQIL WPSSEPAGYG AMSSSSVCQT PLGLGDGWPK  420
DFNPSSQGVS PTLSEITQKL NRVASSEGRT PPPWATALCG GYRAEEPTSK LSCNPTLPLP  480
EQVAPYLPKV AEKAKEPGVV RLFGVNLMEN TNNAAAPTAG NASAGAGETS ARVAGSVEGS  540
GQLSAFSKVT KVANESPREI QSQQSNVGRN RVKVQMHGNA VGRAVDLASL DGYEGLTSEL  600
EQMFEIKDIK QNFKVAFTDN EGDTMKVGDD PWMEFCRMVR KIVIYPIEDD KNMDPRQTSV  660
LAAAPDPDPK ANL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	1e-151	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021740.4