PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021740.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 300aa MW: 33889 Da PI: 8.9149

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021740.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.7	9.4e-23	117	217	1	98
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k+ltpsd++++g +++ +++a+e+ ++ + +++++ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v ++ TRIDC3AG021740.3 117 FCKILTPSDTSTHGGFSVLRRHANEClppldmAMP-TPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYL--RS 206 99**************************97444.44569*******************************************999..44 PP SEE..EEEEE- CS B3 88 sefelvvkvfr 98 +++e +v+v+r TRIDC3AG021740.3 207 ETGEQRVGVRR 217 77778999997 PP
2	Auxin_resp	67.6	4e-23	243	299	1	57
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsser 57 a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a k+ ++vGmRf+m+fe ed++ + TRIDC3AG021740.3 243 ASHALKTNSIFVVYYRPRLSQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVK 299 789**************************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
AGRGRDPELF AELWRACAGP LVEVPQRGER VFYFLQGHLE QVRAEPTDSA LLAEQIKMFQ 60 VPYKILCKVV NVELKAEAET DEVYAQITLQ PESDQDNLPL ICDPILPETP RPVVHTFCKI 120 LTPSDTSTHG GFSVLRRHAN ECLPPLDMAM PTPTQEIISK DLHGSEWRFK HIYRGQPRRH 180 LLTTGWSTFV TSKKLMAGDA FVYLRSETGE QRVGVRRLVQ KQSTMPASVI SSQSMHLGVL 240 ASASHALKTN SIFVVYYRPR LSQSQYIVSV NKYLQASKTG FTVGMRFRMN FEAEDVPVKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46530.1	1e-147	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021740.3