PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG021740.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 700aa    MW: 77068 Da    PI: 6.2635
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG021740.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.64.1e-22119219198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+ltpsd++++g +++ +++a+e+       ++ + +++++ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v    ++
  TRIDC3AG021740.2 119 FCKILTPSDTSTHGGFSVLRRHANEClppldmAMP-TPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYL--RS 208
                       99****************************97444.44569*********************************************999..44 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                       +++e +v+v+r
  TRIDC3AG021740.2 209 ETGEQRVGVRR 219
                       77778999997 PP
2Auxin_resp97.42.1e-32245326183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a k+ ++vGmRf+m+fe ed++ +++ Gt+vg  dl+p +W++S+W+sLk
  TRIDC3AG021740.2 245 ASHALKTNSIFVVYYRPRLSQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDLSP-QWSGSEWKSLK 326
                       789********************************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 700 aa     Download sequence    
SLAGRGRDPE LFAELWRACA GPLVEVPQRG ERVFYFLQGH LEQVRAEPTD SALLAEQIKM  60
FQVPYKILCK VVNVELKAEA ETDEVYAQIT LQPESDQDNL PLICDPILPE TPRPVVHTFC  120
KILTPSDTST HGGFSVLRRH ANECLPPLDM AMPTPTQEII SKDLHGSEWR FKHIYRGQPR  180
RHLLTTGWST FVTSKKLMAG DAFVYLRSET GEQRVGVRRL VQKQSTMPAS VISSQSMHLG  240
VLASASHALK TNSIFVVYYR PRLSQSQYIV SVNKYLQASK TGFTVGMRFR MNFEAEDVPV  300
KKFFGTIVGD GDLSPQWSGS EWKSLKVQWD DSVAICNGPE RVSPWEIDSS DASSPAISAL  360
LQSSAKNKRP RETNENFDLP SQEPTQEFWL SGMTQQHERT YVGSSDPNRI SGYHQILWPS  420
SEPAGYGAMS SSSVCQTPLG LGDGWPKDFN PSSQGVSPTL SEITQKLNRV ASSEGRTPPP  480
WATALCGGYR AEEPTSKLSC NPTLPLPEQV APYLPKVAEK AKEPGVVRLF GVNLMENTNN  540
AAAPTAGNAS AGAGETSARV AGSVEGSGQL SAFSKVTKVA NESPREIQSQ QSNVGRNRVK  600
VQMHGNAVGR AVDLASLDGY EGLTSELEQM FEIKDIKQNF KVAFTDNEGD TMKVGDDPWM  660
EFCRMVRKIV IYPIEDDKNM DPRQTSVLAA APDPDPKANL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.11e-163ARF family protein