PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG021740.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 760aa    MW: 83812.5 Da    PI: 6.5635
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG021740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B369.54.6e-22179279198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+ltpsd++++g +++ +++a+e+       ++ + +++++ +d++g +W++k+iyr++++r++lt+GW+ Fv +++L +gD +v    ++
  TRIDC3AG021740.1 179 FCKILTPSDTSTHGGFSVLRRHANEClppldmAMP-TPTQEIISKDLHGSEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLMAGDAFVYL--RS 268
                       99****************************97444.44569*********************************************999..44 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                       +++e +v+v+r
  TRIDC3AG021740.1 269 ETGEQRVGVRR 279
                       77778999997 PP
2Auxin_resp97.32.3e-32305386183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++t+s+F v+Y+Pr s+s+++v+v+k+++a k+ ++vGmRf+m+fe ed++ +++ Gt+vg  dl+p +W++S+W+sLk
  TRIDC3AG021740.1 305 ASHALKTNSIFVVYYRPRLSQSQYIVSVNKYLQASKTGFTVGMRFRMNFEAEDVPVKKFFGTIVGDGDLSP-QWSGSEWKSLK 386
                       789********************************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 760 aa     Download sequence    
MGRAQQQTLT QGEHHPVPRP DQLLLPPSSL SPRPHSSFPP WEDRTAEPVH HQPTATRVAM  60
AQPGRGRDPE LFAELWRACA GPLVEVPQRG ERVFYFLQGH LEQVRAEPTD SALLAEQIKM  120
FQVPYKILCK VVNVELKAEA ETDEVYAQIT LQPESDQDNL PLICDPILPE TPRPVVHTFC  180
KILTPSDTST HGGFSVLRRH ANECLPPLDM AMPTPTQEII SKDLHGSEWR FKHIYRGQPR  240
RHLLTTGWST FVTSKKLMAG DAFVYLRSET GEQRVGVRRL VQKQSTMPAS VISSQSMHLG  300
VLASASHALK TNSIFVVYYR PRLSQSQYIV SVNKYLQASK TGFTVGMRFR MNFEAEDVPV  360
KKFFGTIVGD GDLSPQWSGS EWKSLKVQWD DSVAICNGPE RVSPWEIDSS DASSPAISAL  420
LQSSAKNKRP RETNENFDLP SQEPTQEFWL SGMTQQHERT YVGSSDPNRI SGYHQILWPS  480
SEPAGYGAMS SSSVCQTPLG LGDGWPKDFN PSSQGVSPTL SEITQKLNRV ASSEGRTPPP  540
WATALCGGYR AEEPTSKLSC NPTLPLPEQV APYLPKVAEK AKEPGVVRLF GVNLMENTNN  600
AAAPTAGNAS AGAGETSARV AGSVEGSGQL SAFSKVTKVA NESPREIQSQ QSNVGRNRVK  660
VQMHGNAVGR AVDLASLDGY EGLTSELEQM FEIKDIKQNF KVAFTDNEGD TMKVGDDPWM  720
EFCRMVRKIV IYPIEDDKNM DPRQTSVLAA APDPDPKANL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46530.11e-161ARF family protein