PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG021580.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 648aa MW: 70614.7 Da PI: 7.9886

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG021580.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	494	540	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TRIDC3AG021580.3 494 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITDLQ 540 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 648 aa Download sequence
QRSGLAVAGP PALDFASPLP IRARDPRSGL MVMKMEVEED GANGGNGGAW TEEDRDLSTT 60 VLGRDAFAYL TKGGGTISEG LVAASSPVDL QNKLQELIES EHPGAGWNYA IFWQLSRTKS 120 GDLVLGWGDG SCREPNDAEL AAAASAGNDD AKQRMRKRVL QRLHKAFGGA DEEDYAPTIG 180 QVTDTEMFFL ASMYFAFPRR AGAPGQVFAA GLPLWVPNSE RNVFPANYCY RGYLASTAGF 240 RTILLVPFET GVLELGSMQQ VAESSDTLQT IKSVFAGTGG NKDIIPSREG NGHIERSPGL 300 AKIFGKDLNL GRSSAGPVIG VSKVDERPWE QRTAGGGSSL LPNVQKGLQS FTWSQARGLN 360 SHQQKFGNGI LIVSNEATHG NNRTADSSTT TQFQLQKAPQ LQKLPLLQKP PQLVKPLQMV 420 NQQQLQPQAP RQIDFSAGTS SKSGVLVTRA AVLDGDSSEV NGLCKEEGTT PVIEDRRPRK 480 RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG DAIAYITDLQ 540 KKLKDMETER ERFLESGMVD PRERAPRPEV DIQVVQDEVL VRVMSPLENH PVKKVFEAFE 600 EADVRVGESK LTGNNGTVVH SFIIKCPGSE QQTREKVIAA MSRAMSSV

Sequence ? help Back to Top

Protein Sequence Length: 648 aa Download sequence

QRSGLAVAGP PALDFASPLP IRARDPRSGL MVMKMEVEED GANGGNGGAW TEEDRDLSTT  60
VLGRDAFAYL TKGGGTISEG LVAASSPVDL QNKLQELIES EHPGAGWNYA IFWQLSRTKS  120
GDLVLGWGDG SCREPNDAEL AAAASAGNDD AKQRMRKRVL QRLHKAFGGA DEEDYAPTIG  180
QVTDTEMFFL ASMYFAFPRR AGAPGQVFAA GLPLWVPNSE RNVFPANYCY RGYLASTAGF  240
RTILLVPFET GVLELGSMQQ VAESSDTLQT IKSVFAGTGG NKDIIPSREG NGHIERSPGL  300
AKIFGKDLNL GRSSAGPVIG VSKVDERPWE QRTAGGGSSL LPNVQKGLQS FTWSQARGLN  360
SHQQKFGNGI LIVSNEATHG NNRTADSSTT TQFQLQKAPQ LQKLPLLQKP PQLVKPLQMV  420
NQQQLQPQAP RQIDFSAGTS SKSGVLVTRA AVLDGDSSEV NGLCKEEGTT PVIEDRRPRK  480
RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNI SKMDKASLLG DAIAYITDLQ  540
KKLKDMETER ERFLESGMVD PRERAPRPEV DIQVVQDEVL VRVMSPLENH PVKKVFEAFE  600
EADVRVGESK LTGNNGTVVH SFIIKCPGSE QQTREKVIAA MSRAMSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	476	484	RRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	8e-62	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG021580.3