PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG020650.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 958aa MW: 105175 Da PI: 5.2403

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG020650.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.2e-19	55	101	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3AG020650.4 55 KGNWTPEEDDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 101 79****************************.**********986 PP
2	Myb_DNA-binding	61.2	2.1e-19	107	153	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.4 107 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 153 79****************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	159	201	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.4 159 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 201 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 958 aa Download sequence
QSSPVMTSDK GKASKKAGEA SGQPSTTHEG KVSNEPQRQR SLNGRTTGPT RRSTKGNWTP 60 EEDDILSRAV QTYNGKNWKK IAECFPDRTD VQCLHRWQKV LNPELIKGPW SKEEDDIIVE 120 MVKKYGPKKW STIAQALPGR IGKQCRERWH NHLNPGINKD AWTQEEEITL IHAHRMYGNK 180 WAELTKFLPG RTDNSIKNHW NSSVKKKIDS YMSSGLLAQV SRLPLIEHHA HFNSSPAITQ 240 QNSEDSDSNA VREVEDSSGC SQSSLAMVSC SQAQDTNLAL SCDLHVNADP SKTEAHDSQS 300 SMCQEGYTST EGVASALSEV HCHASSSRFG SDKLLQQEIS QRMDLQMDID ETPGNSMFEN 360 NQTICSTSNN ERPMLQYEIA PDMPISVLTN VSGAEPKLHF MSEADFSSPN CLKSELWQDV 420 SFQSLLSGPD VVDADSLSRL NHHSDTHSSE ADTHFLAAPN PSHTSNPSSM MMAAYGQDPS 480 LSVPQSLIPN GLSDVADEKS REMQVSGSEM ITCMHDSFGD SEQFATPGST DGRHGASAII 540 ERIPEYGDKQ LTDAEEPASS MAKEPPLAQG EAASDEKQDK GALFYEPPRF PSMDVPFVSC 600 DLVTSGDLQE YSPLGIRQLM RSTMSVTTPL RLWGSPTHDE SPDVVLKSAA KSFISTPSIL 660 KKRPRDLSSP TLEKGIEKKS RTEQDSGVLG TSSVSAQTSC MHAIKDKGIV TESVFCTNRS 720 SSFKPLEKKL EFCDENKGNL GESEQAKDGR NAQNNHPVDE HARGEQCSTA NMVNINDEPP 780 ATVLVEHKGN DISDHGANAM YQKMNTNLQA LSACKETFAK SKSGELIAEK SSPCIQMDYE 840 YVNILADTPG VKRGLESPSA WKSPWFIDMQ YKGSYFISPA DTTYDALGLM KRINVQSASA 900 LADAREVLAS GSQCGNKDFD EENKENVDAE NETGTGKPQN KIMVLKQESL TSTSAPHR

Sequence ? help Back to Top

Protein Sequence Length: 958 aa Download sequence

QSSPVMTSDK GKASKKAGEA SGQPSTTHEG KVSNEPQRQR SLNGRTTGPT RRSTKGNWTP  60
EEDDILSRAV QTYNGKNWKK IAECFPDRTD VQCLHRWQKV LNPELIKGPW SKEEDDIIVE  120
MVKKYGPKKW STIAQALPGR IGKQCRERWH NHLNPGINKD AWTQEEEITL IHAHRMYGNK  180
WAELTKFLPG RTDNSIKNHW NSSVKKKIDS YMSSGLLAQV SRLPLIEHHA HFNSSPAITQ  240
QNSEDSDSNA VREVEDSSGC SQSSLAMVSC SQAQDTNLAL SCDLHVNADP SKTEAHDSQS  300
SMCQEGYTST EGVASALSEV HCHASSSRFG SDKLLQQEIS QRMDLQMDID ETPGNSMFEN  360
NQTICSTSNN ERPMLQYEIA PDMPISVLTN VSGAEPKLHF MSEADFSSPN CLKSELWQDV  420
SFQSLLSGPD VVDADSLSRL NHHSDTHSSE ADTHFLAAPN PSHTSNPSSM MMAAYGQDPS  480
LSVPQSLIPN GLSDVADEKS REMQVSGSEM ITCMHDSFGD SEQFATPGST DGRHGASAII  540
ERIPEYGDKQ LTDAEEPASS MAKEPPLAQG EAASDEKQDK GALFYEPPRF PSMDVPFVSC  600
DLVTSGDLQE YSPLGIRQLM RSTMSVTTPL RLWGSPTHDE SPDVVLKSAA KSFISTPSIL  660
KKRPRDLSSP TLEKGIEKKS RTEQDSGVLG TSSVSAQTSC MHAIKDKGIV TESVFCTNRS  720
SSFKPLEKKL EFCDENKGNL GESEQAKDGR NAQNNHPVDE HARGEQCSTA NMVNINDEPP  780
ATVLVEHKGN DISDHGANAM YQKMNTNLQA LSACKETFAK SKSGELIAEK SSPCIQMDYE  840
YVNILADTPG VKRGLESPSA WKSPWFIDMQ YKGSYFISPA DTTYDALGLM KRINVQSASA  900
LADAREVLAS GSQCGNKDFD EENKENVDAE NETGTGKPQN KIMVLKQESL TSTSAPHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	1e-160	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG020650.4