PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG020650.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 982aa MW: 107766 Da PI: 5.3564

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG020650.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.4e-19	50	96	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l +av+ + g++Wk+Ia++++ Rt+ qc +rwqk+l TRIDC3AG020650.3 50 KGNWTPEEDDILSRAVQTYNGKNWKKIAECFP-DRTDVQCLHRWQKVL 96 79****************************.**********986 PP
2	Myb_DNA-binding	61.2	2.2e-19	102	148	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.3 102 KGPWSKEEDDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 148 79****************************.***********97 PP
3	Myb_DNA-binding	49.1	1.3e-15	154	196	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.3 154 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 196 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 982 aa Download sequence
MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI 60 LSRAVQTYNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL IKGPWSKEED DIIVEMVKKY 120 GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE EEITLIHAHR MYGNKWAELT 180 KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL IEHHAHFNSS PAITQQNSED 240 SDSNAVREVE DSSGCSQSSL AMVSCSQAQD TNLALSCDLH VNADPSKTEA HDSQSSMCQE 300 GYTSTEGVAS ALSEVHCHAS SSRFGSDKLL QQEISQRMDL QMDIDETPGN SMFENNQTIC 360 STSNNERPML QYEIAPDMPI SVLTNVSGAE PKLHFMSEAD FSSPNCLKSE LWQDVSFQSL 420 LSGPDVVDAD SLSRLNHHSD THSSEADTHF LAAPNPSHTS NPSSMMMAAY GQDPSLSVPQ 480 SLIPNGLSDV ADEKSREMQV SGSEMITCMH DSFGDSEQFA TPGSTDGRHG ASAIIERIPE 540 YGDKQLTDAE EPASSMAKEP PLAQGEAASD EKQDKGALFY EPPRFPSMDV PFVSCDLVTS 600 GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV LKSAAKSFIS TPSILKKRPR 660 DLSSPTLEKG IEKKSRTEQD SGVLGTSSVS AQTSCMHAIK DKGIVTESVF CTNRSSSFKP 720 LEKKLEFCDE NKGNLGESEQ AKDGRNAQNN HPVDEHARGE QCSTANMVNI NDEPPATVLV 780 EHKGNDISDH GANAMYQKMN TNLQALSACK ETFAKSKSGE LIAEKSSPCI QMDYEYVNIL 840 ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD ALGLMKRINV QSASALADAR 900 EVLASGSQCG NKDFDEENKE NVDAENETGT GKPQNKIMAE ARVLDFNECA TPVRTADSSV 960 GGRLTKSLSS PIPSSHLLKK FR

Sequence ? help Back to Top

Protein Sequence Length: 982 aa Download sequence

MTSDKGKASK KAGEASGQPS TTHEGKVSNE PQRQRSLNGR TTGPTRRSTK GNWTPEEDDI  60
LSRAVQTYNG KNWKKIAECF PDRTDVQCLH RWQKVLNPEL IKGPWSKEED DIIVEMVKKY  120
GPKKWSTIAQ ALPGRIGKQC RERWHNHLNP GINKDAWTQE EEITLIHAHR MYGNKWAELT  180
KFLPGRTDNS IKNHWNSSVK KKIDSYMSSG LLAQVSRLPL IEHHAHFNSS PAITQQNSED  240
SDSNAVREVE DSSGCSQSSL AMVSCSQAQD TNLALSCDLH VNADPSKTEA HDSQSSMCQE  300
GYTSTEGVAS ALSEVHCHAS SSRFGSDKLL QQEISQRMDL QMDIDETPGN SMFENNQTIC  360
STSNNERPML QYEIAPDMPI SVLTNVSGAE PKLHFMSEAD FSSPNCLKSE LWQDVSFQSL  420
LSGPDVVDAD SLSRLNHHSD THSSEADTHF LAAPNPSHTS NPSSMMMAAY GQDPSLSVPQ  480
SLIPNGLSDV ADEKSREMQV SGSEMITCMH DSFGDSEQFA TPGSTDGRHG ASAIIERIPE  540
YGDKQLTDAE EPASSMAKEP PLAQGEAASD EKQDKGALFY EPPRFPSMDV PFVSCDLVTS  600
GDLQEYSPLG IRQLMRSTMS VTTPLRLWGS PTHDESPDVV LKSAAKSFIS TPSILKKRPR  660
DLSSPTLEKG IEKKSRTEQD SGVLGTSSVS AQTSCMHAIK DKGIVTESVF CTNRSSSFKP  720
LEKKLEFCDE NKGNLGESEQ AKDGRNAQNN HPVDEHARGE QCSTANMVNI NDEPPATVLV  780
EHKGNDISDH GANAMYQKMN TNLQALSACK ETFAKSKSGE LIAEKSSPCI QMDYEYVNIL  840
ADTPGVKRGL ESPSAWKSPW FIDMQYKGSY FISPADTTYD ALGLMKRINV QSASALADAR  900
EVLASGSQCG NKDFDEENKE NVDAENETGT GKPQNKIMAE ARVLDFNECA TPVRTADSSV  960
GGRLTKSLSS PIPSSHLLKK FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	1e-163	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG020650.3