PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG020650.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 873aa MW: 95475 Da PI: 4.9472

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG020650.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.6	1.4e-13	1	39	9	48
HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 9 dellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 d+++v+ vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.10 1 DDIIVEMVKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 39 6899******************.***********97 PP
2	Myb_DNA-binding	49.2	1.2e-15	45	87	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.10 45 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 87 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 873 aa Download sequence
DDIIVEMVKK YGPKKWSTIA QALPGRIGKQ CRERWHNHLN PGINKDAWTQ EEEITLIHAH 60 RMYGNKWAEL TKFLPGRTDN SIKNHWNSSV KKKIDSYMSS GLLAQVSRLP LIEHHAHFNS 120 SPAITQQNSE DSDSNAVREV EDSSGCSQSS LAMVSCSQAQ DTNLALSCDL HVNADPSKTE 180 AHDSQSSMCQ EGYTSTEGVA SALSEVHCHA SSSRFGSDKL LQQEISQRMD LQMDIDETPG 240 NSMFENNQTI CSTSNNERPM LQYEIAPDMP ISVLTNVSGA EPKLHFMSEA DFSSPNCLKS 300 ELWQDVSFQS LLSGPDVVDA DSLSRLNHHS DTHSSEADTH FLAAPNPSHT SNPSSMMMAA 360 YGQDPSLSVP QSLIPNGLSD VADEKSREMQ VSGSEMITCM HDSFGDSEQF ATPGSTDGRH 420 GASAIIERIP EYGDKQLTDA EEPASSMAKE PPLAQGEAAS DEKQDKGALF YEPPRFPSMD 480 VPFVSCDLVT SGDLQEYSPL GIRQLMRSTM SVTTPLRLWG SPTHDESPDV VLKSAAKSFI 540 STPSILKKRP RDLSSPTLEK GIEKKSRTEQ DSGVLGTSSV SAQTSCMHAI KDKGIVTESV 600 FCTNRSSSFK PLEKKLEFCD ENKGNLGESE QAKDGRNAQN NHPVDEHARG EQCSTANMVN 660 INDEPPATVL VEHKGNDISD HGANAMYQKM NTNLQALSAC KETFAKSKSG ELIAEKSSPC 720 IQMDYEYVNI LADTPGVKRG LESPSAWKSP WFIDMQYKGS YFISPADTTY DALGLMKRIN 780 VQSASALADA REVLASGSQC GNKDFDEENK ENVDAENETG TGKPQNKIMA EARVLDFNEC 840 ATPVRTADSS VGGRLTKSLS SPIPSSHLLK KFR

Sequence ? help Back to Top

Protein Sequence Length: 873 aa Download sequence

DDIIVEMVKK YGPKKWSTIA QALPGRIGKQ CRERWHNHLN PGINKDAWTQ EEEITLIHAH  60
RMYGNKWAEL TKFLPGRTDN SIKNHWNSSV KKKIDSYMSS GLLAQVSRLP LIEHHAHFNS  120
SPAITQQNSE DSDSNAVREV EDSSGCSQSS LAMVSCSQAQ DTNLALSCDL HVNADPSKTE  180
AHDSQSSMCQ EGYTSTEGVA SALSEVHCHA SSSRFGSDKL LQQEISQRMD LQMDIDETPG  240
NSMFENNQTI CSTSNNERPM LQYEIAPDMP ISVLTNVSGA EPKLHFMSEA DFSSPNCLKS  300
ELWQDVSFQS LLSGPDVVDA DSLSRLNHHS DTHSSEADTH FLAAPNPSHT SNPSSMMMAA  360
YGQDPSLSVP QSLIPNGLSD VADEKSREMQ VSGSEMITCM HDSFGDSEQF ATPGSTDGRH  420
GASAIIERIP EYGDKQLTDA EEPASSMAKE PPLAQGEAAS DEKQDKGALF YEPPRFPSMD  480
VPFVSCDLVT SGDLQEYSPL GIRQLMRSTM SVTTPLRLWG SPTHDESPDV VLKSAAKSFI  540
STPSILKKRP RDLSSPTLEK GIEKKSRTEQ DSGVLGTSSV SAQTSCMHAI KDKGIVTESV  600
FCTNRSSSFK PLEKKLEFCD ENKGNLGESE QAKDGRNAQN NHPVDEHARG EQCSTANMVN  660
INDEPPATVL VEHKGNDISD HGANAMYQKM NTNLQALSAC KETFAKSKSG ELIAEKSSPC  720
IQMDYEYVNI LADTPGVKRG LESPSAWKSP WFIDMQYKGS YFISPADTTY DALGLMKRIN  780
VQSASALADA REVLASGSQC GNKDFDEENK ENVDAENETG TGKPQNKIMA EARVLDFNEC  840
ATPVRTADSS VGGRLTKSLS SPIPSSHLLK KFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	1e-114	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG020650.10