PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG020650.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 867aa MW: 94790.2 Da PI: 5.0554

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG020650.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.5	2.4e-11	2	33	16	48
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 vk++G++ W+tIa+ ++ gR +kqc++rw+++l TRIDC3AG020650.1 2 VKKYGPKKWSTIAQALP-GRIGKQCRERWHNHL 33 9**************.***********97 PP
2	Myb_DNA-binding	49.3	1.2e-15	39	81	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE+ l++a++++G++ W+ + ++ gRt++++k++w+ TRIDC3AG020650.1 39 KDAWTQEEEITLIHAHRMYGNK-WAELTKFLP-GRTDNSIKNHWN 81 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 867 aa Download sequence
MVKKYGPKKW STIAQALPGR IGKQCRERWH NHLNPGINKD AWTQEEEITL IHAHRMYGNK 60 WAELTKFLPG RTDNSIKNHW NSSVKKKIDS YMSSGLLAQV SRLPLIEHHA HFNSSPAITQ 120 QNSEDSDSNA VREVEDSSGC SQSSLAMVSC SQAQDTNLAL SCDLHVNADP SKTEAHDSQS 180 SMCQEGYTST EGVASALSEV HCHASSSRFG SDKLLQQEIS QRMDLQMDID ETPGNSMFEN 240 NQTICSTSNN ERPMLQYEIA PDMPISVLTN VSGAEPKLHF MSEADFSSPN CLKSELWQDV 300 SFQSLLSGPD VVDADSLSRL NHHSDTHSSE ADTHFLAAPN PSHTSNPSSM MMAAYGQDPS 360 LSVPQSLIPN GLSDVADEKS REMQVSGSEM ITCMHDSFGD SEQFATPGST DGRHGASAII 420 ERIPEYGDKQ LTDAEEPASS MAKEPPLAQG EAASDEKQDK GALFYEPPRF PSMDVPFVSC 480 DLVTSGDLQE YSPLGIRQLM RSTMSVTTPL RLWGSPTHDE SPDVVLKSAA KSFISTPSIL 540 KKRPRDLSSP TLEKGIEKKS RTEQDSGVLG TSSVSAQTSC MHAIKDKGIV TESVFCTNRS 600 SSFKPLEKKL EFCDENKGNL GESEQAKDGR NAQNNHPVDE HARGEQCSTA NMVNINDEPP 660 ATVLVEHKGN DISDHGANAM YQKMNTNLQA LSACKETFAK SKSGELIAEK SSPCIQMDYE 720 YVNILADTPG VKRGLESPSA WKSPWFIDMQ YKGSYFISPA DTTYDALGLM KRINVQSASA 780 LADAREVLAS GSQCGNKDFD EENKENVDAE NETGTGKPQN KIMAEARVLD FNECATPVRT 840 ADSSVGGRLT KSLSSPIPSS HLLKKFR

Sequence ? help Back to Top

Protein Sequence Length: 867 aa Download sequence

MVKKYGPKKW STIAQALPGR IGKQCRERWH NHLNPGINKD AWTQEEEITL IHAHRMYGNK  60
WAELTKFLPG RTDNSIKNHW NSSVKKKIDS YMSSGLLAQV SRLPLIEHHA HFNSSPAITQ  120
QNSEDSDSNA VREVEDSSGC SQSSLAMVSC SQAQDTNLAL SCDLHVNADP SKTEAHDSQS  180
SMCQEGYTST EGVASALSEV HCHASSSRFG SDKLLQQEIS QRMDLQMDID ETPGNSMFEN  240
NQTICSTSNN ERPMLQYEIA PDMPISVLTN VSGAEPKLHF MSEADFSSPN CLKSELWQDV  300
SFQSLLSGPD VVDADSLSRL NHHSDTHSSE ADTHFLAAPN PSHTSNPSSM MMAAYGQDPS  360
LSVPQSLIPN GLSDVADEKS REMQVSGSEM ITCMHDSFGD SEQFATPGST DGRHGASAII  420
ERIPEYGDKQ LTDAEEPASS MAKEPPLAQG EAASDEKQDK GALFYEPPRF PSMDVPFVSC  480
DLVTSGDLQE YSPLGIRQLM RSTMSVTTPL RLWGSPTHDE SPDVVLKSAA KSFISTPSIL  540
KKRPRDLSSP TLEKGIEKKS RTEQDSGVLG TSSVSAQTSC MHAIKDKGIV TESVFCTNRS  600
SSFKPLEKKL EFCDENKGNL GESEQAKDGR NAQNNHPVDE HARGEQCSTA NMVNINDEPP  660
ATVLVEHKGN DISDHGANAM YQKMNTNLQA LSACKETFAK SKSGELIAEK SSPCIQMDYE  720
YVNILADTPG VKRGLESPSA WKSPWFIDMQ YKGSYFISPA DTTYDALGLM KRINVQSASA  780
LADAREVLAS GSQCGNKDFD EENKENVDAE NETGTGKPQN KIMAEARVLD FNECATPVRT  840
ADSSVGGRLT KSLSSPIPSS HLLKKFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	1e-111	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG020650.1