PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC3AG017280.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 197aa MW: 22150.9 Da PI: 9.9555 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.4 | 6.9e-32 | 49 | 99 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyeys+ TRIDC3AG017280.4 49 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 99 79***********************************************95 PP | |||||||
2 | K-box | 80.6 | 3.6e-27 | 117 | 197 | 4 | 84 |
K-box 4 ssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 s++ ++e +a+++qqe++kL+++i++Lq+++R l+ +++++++l++L+qLe +Lek++ kiR++Knel+++++e++qk+e TRIDC3AG017280.4 117 SNS-GtVAEVNAQYYQQESSKLRQQISSLQNSNRSLVRDSVSTMTLRDLKQLEGRLEKGIAKIRARKNELMYAEVEYMQKRE 197 233.25999***********************************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
NNRWIASFAD LSCGASGVTV NDHQLAAPAP EDSAAAGSEK MGRGRIEIKR IENTTNRQVT 60 FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYSNN SVKATIERYK KANSDTSNSG 120 TVAEVNAQYY QQESSKLRQQ ISSLQNSNRS LVRDSVSTMT LRDLKQLEGR LEKGIAKIRA 180 RKNELMYAEV EYMQKRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18960.1 | 9e-90 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC3AG017280.4 |