PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG017080.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 844aa    MW: 91465.8 Da    PI: 6.1473
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG017080.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.32.7e-181674357
                      --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      k  ++t+eq+e+Le+l++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  TRIDC3AG017080.2 16 KYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECavlaSVDPKQIKVWFQNRRCREKQ 74
                      6789*****************************************************97 PP
2START166.22.4e-521633642198
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++ g a+ra+g+v m++a  v+e+l+d++ W ++++++e+++v+  g  g+++
  TRIDC3AG017080.2 163 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMEVVNVLPAGsnGTIE 254
                       789*******************************************************.8888888888************************ PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++l+a+++l+p Rdf+  Ry+  l +g++v++++S++ +q  p+    +++vR+e+lpSg+li+p+++g+s +++v+h dl+ +++++++
  TRIDC3AG017080.2 255 LLYMQLYAPTTLAPaRDFWLMRYTSILDDGSLVVCERSLSTKQGGPSmplVQPFVRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPEVV 347
                       **********************************************999999***************************************** PP

                       HHHHHHHHHHHHHHHHH CS
             START 182 rslvksglaegaktwva 198
                       r+l++s+++ ++k+ +a
  TRIDC3AG017080.2 348 RPLYESSAMVAQKMSMA 364
                       *************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 844 aa     Download sequence    
REAREAAAAA AMDASKYVRY TPEQVEALER LYYECPKPSS LRRQQLVREC AVLASVDPKQ  60
IKVWFQNRRC REKQRKESGR LQSLNRKLAA MNKLLMEEND RLQKQVSHLV YENGYYCQQT  120
HSAGLATTDT SCESVVTSGQ QNGVVVVPPP PPRDASPAGL MSIAEETLTE FLSKATGTAV  180
EWVQMPGMKP GPDSIGIIAI SHGCAGVAAR ACGLVGMEPA KVAEILKDRP LWLRDCRSME  240
VVNVLPAGSN GTIELLYMQL YAPTTLAPAR DFWLMRYTSI LDDGSLVVCE RSLSTKQGGP  300
SMPLVQPFVR GEMLPSGFLI RPSDGGGSVI HIVDHLDLEP WSVPEVVRPL YESSAMVAQK  360
MSMALRYLRQ VAHEDTHSVI TGWGRQPAAL RALSQKLTRG FNETLGGLAD DGWSVIESDG  420
VDDVCISVNS SPSKLMSCNA TFNDGLPMVS TGVLCAKASM LLQDVSPPSL LRFLREHRSQ  480
WADSSLDAFF ASALKPNFCN LPMSRLGGFS GQVILPLAHT FDPEEFLEVI KIGNASNYQD  540
TLMHRDLFLL QMYNGIDENP MGTCSELIFA PIDASFSDDS PLLPSGFRII PIDSPLDTSS  600
PNCTLDLAST LEAGTPGSRI AGHSRSGSKA VMTIAFQFAF ESHLQDSVAA MARQYMRSII  660
SSVQRIALAL SSSHLVPHGS SRLLPPVTPE AATLSRWIVQ SYRFHFGAEL IKAADAGSGE  720
SALKALWHHT SAILCCSLKA MPVLTFANQS GLDMLETTLA ALREMTMDKV LDCDQGRKGL  780
LCADLMASVA EQGYACVEGG TCASSMGRPA SYGKAVAWKV LDDGGAGAGG AHCVCFAFMD  840
WSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.10.0HD-ZIP family protein