PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3AG017080.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 428aa    MW: 46677.6 Da    PI: 6.9142
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3AG017080.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.41.9e-062174257
                       HHHHHHHHHHHHHHHC CS
           Homeobox 42 rqVkvWFqNrRakekk 57
                       +q+kvWFqNrR +ek+
  TRIDC3AG017080.16  2 KQIKVWFQNRRCREKQ 17
                       8*************97 PP
2START173.71.2e-541063132204
                        HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEE CS
              START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..gal 91 
                        +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s+++ g a+ra+g+v m++a  v+e+l+d++ W ++++++e+++v+  g  g++
  TRIDC3AG017080.16 106 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIIAISHGCAGVAARACGLVGMEPA-KVAEILKDRPLWLRDCRSMEVVNVLPAGsnGTI 196
                        789*******************************************************.8888888888*********************** PP

                        EEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHH CS
              START  92 qlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphw 179
                        +l +++l+a+++l+p Rdf+  Ry+  l +g++v++++S++ +q  p+    +++vR+e+lpSg+li+p+++g+s +++v+h dl+ +++++
  TRIDC3AG017080.16 197 ELLYMQLYAPTTLAPaRDFWLMRYTSILDDGSLVVCERSLSTKQGGPSmplVQPFVRGEMLPSGFLIRPSDGGGSVIHIVDHLDLEPWSVPE 288
                        ***********************************************999999*************************************** PP

                        HHHHHHHHHHHHHHHHHHHHTXXXX CS
              START 180 llrslvksglaegaktwvatlqrqc 204
                        ++r+l++s+++ ++k+ +a+l++++
  TRIDC3AG017080.16 289 VVRPLYESSAMVAQKMSMAALRYLR 313
                        *********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
PKQIKVWFQN RRCREKQRKE SGRLQSLNRK LAAMNKLLME ENDRLQKQVS HLVYENGYYC  60
QQTHSAGLAT TDTSCESVVT SGQQNGVVVV PPPPPRDASP AGLMSIAEET LTEFLSKATG  120
TAVEWVQMPG MKPGPDSIGI IAISHGCAGV AARACGLVGM EPAKVAEILK DRPLWLRDCR  180
SMEVVNVLPA GSNGTIELLY MQLYAPTTLA PARDFWLMRY TSILDDGSLV VCERSLSTKQ  240
GGPSMPLVQP FVRGEMLPSG FLIRPSDGGG SVIHIVDHLD LEPWSVPEVV RPLYESSAMV  300
AQKMSMAALR YLRQVAHEDT HSVITGWGRQ PAALRALSQK LTRGFNETLG GLADDGWSVI  360
ESDGVDDVCI SVNSSPSKLM SCNATFNDGL PMVSTGVLCA KASMLLQDVS PPSLLRFLRE  420
HRSQWADS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.30.0HD-ZIP family protein