PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3AG016820.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-X1

Protein Properties

Length: 852aa MW: 93659.7 Da PI: 8.4299

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3AG016820.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.5	4.9e-07	364	383	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCpp.Cp 19 CG+HkC + CH+GpC++ C+ TRIDC3AG016820.8 364 CGRHKCPERCHRGPCDVtCR 383 ****************97 PP
2	zf-NF-X1	17.3	1.1e-05	417	434	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CG+H C++ C+ G+CppC TRIDC3AG016820.8 417 CGRHACKRRCCVGDCPPC 434 ****************** PP
3	zf-NF-X1	20.8	8.1e-07	444	463	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+HkC ++CH+G C pCp+ TRIDC3AG016820.8 444 CGNHKCLSPCHRGACSPCPL 463 ******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 852 aa Download sequence
MPSSYAAAAA SSSRKPAPFT TATATTRKPA PLTAPAPPPP NPSHVSDSDP SSYSSSGEET 60 DLSACDPATA SVLSTYLSVA GNGADLSKVG IFLNSAARRR SPPCLICLDP IRPSDPVWSC 120 SASCFALLHL PCIQSWAHQS ASAAPSPTWG CPKCRVAYPK SQTPTSYHCF CSKTEDPPAD 180 PWILPHSCGD VCGRRLNSNP DSGCEHTCLL LCHPGPCPPC PAVVPNARCF CGAHREPRRC 240 AHQRYSCKGK CNKRLSCELH RCPVDCHDGP CPPCAVRGNH KCECGETMVE RLCSERVFQC 300 KRECSGMLEC GKHRCERGCH GGKCGECPLR GQRTCPCGKK DYPRLECDVE AATCGSTCEK 360 VLGCGRHKCP ERCHRGPCDV TCRLVIKKSC RCGVLKKELP CHQDLTCERK CQRLRACGRH 420 ACKRRCCVGD CPPCAETCDR RLRCGNHKCL SPCHRGACSP CPLMKTISCF CGKTYFEVPC 480 GTEKNQKPPK CSKRCNIDRL CRHKLDCRPH KCHYGACPPC KLICGEELSC GHKCKERCHG 540 SIPPPNPEFT VKPMKKKMEK HIECTPGTPC PPCQEVVLVP CFGEHLGQER AIPCSKSRQF 600 PCQNLCGNLL HCGNHYCTKD CHVLEIPSDQ RKADTILSLS RNNTLAEPCE RCNLRCQRAR 660 DPPCSHPCPL RCHLSDCLPC KVLVKKSCHC GAMTHAFECV YYNNLNAKQQ LKARSCSGPC 720 HRKLPNCPHL CSEICHPGQC PSVDQCMKKV NVRCACNTLK KEWVCQDVLK EYRRSGRDPK 780 EVPKGQFGVG LLACGGDCVK KVNVSAAELH LRKVQETKSP AAEVTNVPKR RKKRDRGAQE 840 PVQVSMWQVC EI

Sequence ? help Back to Top

Protein Sequence Length: 852 aa Download sequence

MPSSYAAAAA SSSRKPAPFT TATATTRKPA PLTAPAPPPP NPSHVSDSDP SSYSSSGEET  60
DLSACDPATA SVLSTYLSVA GNGADLSKVG IFLNSAARRR SPPCLICLDP IRPSDPVWSC  120
SASCFALLHL PCIQSWAHQS ASAAPSPTWG CPKCRVAYPK SQTPTSYHCF CSKTEDPPAD  180
PWILPHSCGD VCGRRLNSNP DSGCEHTCLL LCHPGPCPPC PAVVPNARCF CGAHREPRRC  240
AHQRYSCKGK CNKRLSCELH RCPVDCHDGP CPPCAVRGNH KCECGETMVE RLCSERVFQC  300
KRECSGMLEC GKHRCERGCH GGKCGECPLR GQRTCPCGKK DYPRLECDVE AATCGSTCEK  360
VLGCGRHKCP ERCHRGPCDV TCRLVIKKSC RCGVLKKELP CHQDLTCERK CQRLRACGRH  420
ACKRRCCVGD CPPCAETCDR RLRCGNHKCL SPCHRGACSP CPLMKTISCF CGKTYFEVPC  480
GTEKNQKPPK CSKRCNIDRL CRHKLDCRPH KCHYGACPPC KLICGEELSC GHKCKERCHG  540
SIPPPNPEFT VKPMKKKMEK HIECTPGTPC PPCQEVVLVP CFGEHLGQER AIPCSKSRQF  600
PCQNLCGNLL HCGNHYCTKD CHVLEIPSDQ RKADTILSLS RNNTLAEPCE RCNLRCQRAR  660
DPPCSHPCPL RCHLSDCLPC KVLVKKSCHC GAMTHAFECV YYNNLNAKQQ LKARSCSGPC  720
HRKLPNCPHL CSEICHPGQC PSVDQCMKKV NVRCACNTLK KEWVCQDVLK EYRRSGRDPK  780
EVPKGQFGVG LLACGGDCVK KVNVSAAELH LRKVQETKSP AAEVTNVPKR RKKRDRGAQE  840
PVQVSMWQVC EI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05660.1	0.0	NF-X1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3AG016820.8